RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FNDC3BQ53EP0 1204 aaKnown RBP16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 LINC00523Q86TU6 105 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 UBALD2Q8IYN6 164 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 PGBD5Q8N414 524 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 OR2AP1Q8NGE2 309 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 IFT81Q8WYA0 676 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 CPT1BQ92523 772 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 ART4Q93070 314 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 SHDQ96IW2 340 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 SEMA3CQ99985 751 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 LRRC40Q9H9A6 602 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 SCUBE2Q9NQ36 999 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 LHX3Q9UBR4 397 aa16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 MTRF1LQ9UGC7 380 aaKnown RBP16.06■□□□□ 0.16
TRAFD1-203ENST00000547063 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 ESYT3A0FGR9 886 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 K7ERQ8 282 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 INSIG1O15503 277 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 SMAD6O43541 496 aaKnown RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 NARSO43776 548 aaKnown RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 BMP1P13497 986 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 CR2P20023 1033 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 MAXP61244 160 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 ELF2Q15723 593 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 MLF2Q15773 248 aaPredicted RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 PTPRNQ16849 979 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 TMEM196Q5HYL7 178 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 NAPEPLDQ6IQ20 393 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 HIBCHQ6NVY1 386 aaPredicted RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 TRMT11Q7Z4G4 463 aaKnown RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 SRLQ86TD4 932 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 KLHDC8BQ8IXV7 354 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 MCUQ8NE86 351 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 ARRDC2Q8TBH0 407 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 CYB5D2Q8WUJ1 264 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 FAM3CQ92520 227 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 ZNF419Q96HQ0 510 aaPredicted RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 MRGPRX3Q96LB0 322 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 TUBGCP5Q96RT8 1024 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 FSD1LQ9BXM9 530 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 PARD6BQ9BYG5 372 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 GRHL1Q9NZI5 618 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 THAP10Q9P2Z0 257 aaPredicted RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 WNT16Q9UBV4 365 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 SUN2Q9UH99 717 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 SLCO3A1Q9UIG8 710 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 MRPS17Q9Y2R5 130 aaKnown RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 ARIH1Q9Y4X5 557 aaPredicted RBP16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 ACTL7AQ9Y615 435 aa16.05■□□□□ 0.16
TRAFD1-203ENST00000547063 EDDM13A0A1B0GTR0 161 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 POP4O95707 220 aaKnown RBP16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 AP2A1O95782 977 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 CD86P42081 329 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 PLTPP55058 493 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 DSC2Q02487 901 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 MESP2Q0VG99 397 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 ZNF234Q14588 700 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 KCNJ11Q14654 390 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 PON2Q15165 354 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 CARD16Q5EG05 197 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 FAXCQ5TGI0 409 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 TXNDC11Q6PKC3 985 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 SERPINA13PQ6UXR4 307 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 ZNF852Q6ZMS4 543 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 TPRG1Q6ZUI0 275 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 TAB3Q8N5C8 712 aaPredicted RBP16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 NAT8LQ8N9F0 302 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 SORCS1Q8WY21 1168 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 RBM15Q96T37 977 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 XAB2Q9HCS7 855 aaKnown RBP16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 RAB21Q9UL25 225 aa16.04■□□□□ 0.16
TRAFD1-203ENST00000547063 MUSKO15146 869 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 ERLIN1O75477 346 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 SUN1O94901 812 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 EPOP01588 193 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 MLNP12872 115 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 SKOR1P84550 965 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 NIPAL4Q0D2K0 466 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 HNRNPA1L2Q32P51 320 aaKnown RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 HSF5Q4G112 596 aaPredicted RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 DGKKQ5KSL6 1271 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 KCTD11Q693B1 232 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 NAIF1Q69YI7 327 aaPredicted RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 SDE2Q6IQ49 451 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 CCNI2Q6ZMN8 369 aaPredicted RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 PRPF39Q86UA1 669 aaKnown RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 RYBPQ8N488 228 aaPredicted RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 PDCD7Q8N8D1 485 aaKnown RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 ZNF513Q8N8E2 541 aaPredicted RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 SPATA22Q8NHS9 363 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 FRS2Q8WU20 508 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 PRCCQ92733 491 aaPredicted RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 TADA1Q96BN2 335 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 MYO19Q96H55 970 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 LRIG1Q96JA1 1093 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 FMO2Q99518 471 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 HINFPQ9BQA5 517 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms