RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 DMTF1Q9Y222 760 aa16.16■□□□□ 0.18
DDX54-204ENST00000546898 POP4O95707 220 aaKnown RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 ADRB1P08588 477 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 TMEM253P0C7T8 217 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 RARAP10276 462 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 CEACAM1P13688 526 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 TCF4P15884 667 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 NOVA1P51513 510 aaKnown RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 RHOAP61586 193 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 RAD51Q06609 339 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 HADHQ16836 314 aaKnown RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 SMTNL2Q2TAL5 461 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 SETMARQ53H47 684 aaPredicted RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 SLC45A4Q5BKX6 768 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 AFMIDQ63HM1 303 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 LEKR1Q6ZMV7 388 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 PIP4P1Q86T03 277 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 ZSCAN30Q86W11 494 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 RYBPQ8N488 228 aaPredicted RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 OR2I1PQ8NGU4 316 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 HSPH1Q92598 858 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 CELF6Q96J87 481 aaKnown RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 CHP1Q99653 195 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 PACSIN1Q9BY11 444 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 SLC39A8Q9C0K1 460 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 GAREM1Q9H706 876 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 NHEJ1Q9H9Q4 299 aaPredicted RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 PDFQ9HBH1 243 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 RCOR3Q9P2K3 495 aaPredicted RBP16.15■□□□□ 0.18
DDX54-204ENST00000546898 ANKRD6Q9Y2G4 727 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 SHROOM3Q8TF72 1996 aa16.15■□□□□ 0.18
DDX54-204ENST00000546898 VILLO15195 856 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 AP1G1O43747 822 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 PRAMEF11O60813 436 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 PROSCO94903 275 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 ADRB3P13945 408 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 KCNA4P22459 653 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 CD38P28907 300 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 CTSKP43235 329 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 C21orf59P57076 290 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 HNRNPDQ14103 355 aaKnown RBP16.14■□□□□ 0.17
DDX54-204ENST00000546898 KIF19Q2TAC6 998 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 HLA-BQ31612 363 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 MYLK3Q32MK0 819 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 PSAPL1Q6NUJ1 521 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 POLNQ7Z5Q5 900 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 ARHGAP12Q8IWW6 846 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 RAB7BQ96AH8 199 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 SERAC1Q96JX3 654 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 PCDH18Q9HCL0 1135 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 AASDHPPTQ9NRN7 309 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 MFHAS1Q9Y4C4 1052 aa16.14■□□□□ 0.17
DDX54-204ENST00000546898 RNF103O00237 685 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 KRIT1O00522 736 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 DFNA5O60443 496 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 RNGTTO60942 597 aaKnown RBP16.13■□□□□ 0.17
DDX54-204ENST00000546898 CD59P13987 128 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 MAN1A1P33908 653 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 SERPINB6P35237 376 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 PAPOLAP51003 745 aaKnown RBP16.13■□□□□ 0.17
DDX54-204ENST00000546898 GRM3Q14832 879 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 ZNF423Q2M1K9 1284 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 ZNF805Q5CZA5 627 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 ATXN7L2Q5T6C5 722 aaPredicted RBP16.13■□□□□ 0.17
DDX54-204ENST00000546898 KIAA1161Q6NSJ0 714 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 FBXL19Q6PCT2 694 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 PARS2Q7L3T8 475 aaKnown RBP16.13■□□□□ 0.17
DDX54-204ENST00000546898 IQCHQ86VS3 1027 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 HORMAD1Q86X24 394 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 RHOT2Q8IXI1 618 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 NPWQ8N729 165 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 DEFB124Q8NES8 71 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 OR6K2Q8NGY2 324 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 FAM71BQ8TC56 605 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 MRFAP1L1Q96HT8 127 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 CSPG4P5Q96PW8 444 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 SP110Q9HB58 689 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 LHX3Q9UBR4 397 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 PCDHGB2Q9Y5G2 931 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 SNX11Q9Y5W9 270 aa16.13■□□□□ 0.17
DDX54-204ENST00000546898 A0A1W2PQU0 124 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 A0A1W2PR77 199 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 C16orf96A6NNT2 1141 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 PRAMEF26H0Y7S4 382 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 J3KR12 359 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 DFFAO00273 331 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 MAGEC1O60732 1142 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 UGT2B4P06133 528 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 MAT2AP31153 395 aaKnown RBP16.12■□□□□ 0.17
DDX54-204ENST00000546898 SSR1P43307 286 aaKnown RBP16.12■□□□□ 0.17
DDX54-204ENST00000546898 CDH6P55285 790 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 IL10RBQ08334 325 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 OVGP1Q12889 678 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 KRT81Q14533 505 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 RFTN1Q14699 578 aaPredicted RBP16.12■□□□□ 0.17
DDX54-204ENST00000546898 CYTH1Q15438 398 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 TXNRD3NBQ6F5E7 133 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 TMCO3Q6UWJ1 677 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 LAYNQ6UX15 382 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 GDPD4Q6W3E5 623 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms