RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
SP140-213ENST00000543928 RASGEF1CQ8N431 466 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 PIP4K2CQ8TBX8 421 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 MS4A14Q96JA4 679 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 IL12RB2Q99665 862 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 PRRX2Q99811 253 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 MGME1Q9BQP7 344 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 FAM126AQ9BYI3 521 aaPredicted RBP13.82□□□□□ -0.2
SP140-213ENST00000543928 CEP41Q9BYV8 373 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 C10orf88Q9H8K7 445 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 NT5MQ9NPB1 228 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 IL36AQ9UHA7 158 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 EVLQ9UI08 416 aaPredicted RBP13.82□□□□□ -0.2
SP140-213ENST00000543928 SARDHQ9UL12 918 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 TTLL3Q9Y4R7 772 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 WASF2Q9Y6W5 498 aa13.82□□□□□ -0.2
SP140-213ENST00000543928 CCDC163A0A0D9SF12 145 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 TTC24A2A3L6 582 aaPredicted RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 C1QTNF3-AMACRE9PGA6 284 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 RNF103O00237 685 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 MID1O15344 667 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 LEFTY1O75610 366 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 GJB3O75712 270 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 ADH1BP00325 375 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 DNTTP04053 509 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 PRNPP04156 253 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 HLA-DQB2P05538 268 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 C7P10643 843 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 ACADMP11310 421 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 TCP1P17987 556 aaKnown RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 SLC8A1P32418 973 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 CSNK1DP48730 415 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 SCNN1BP51168 640 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 NRLP54845 237 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 ZBTB16Q05516 673 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 RAD51Q06609 339 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 ITKQ08881 620 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 NSUN2Q08J23 767 aaKnown RBP eCLIP13.81□□□□□ -0.2
SP140-213ENST00000543928 SIX1Q15475 284 aaPredicted RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 TTC31Q49AM3 519 aaPredicted RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 FAM182AQ5T1J6 154 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 FAM46CQ5VWP2 391 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 PAPD7Q5XG87 772 aaKnown RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 DARS2Q6PI48 645 aaKnown RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 SYT10Q6XYQ8 523 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 LONP2Q86WA8 852 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 PRSS33Q8NF86 280 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 MAIP1Q8WWC4 291 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 HTR3CQ8WXA8 447 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 NELL1Q92832 810 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 POLR1EQ9GZS1 481 aaKnown RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 PABPC3Q9H361 631 aaKnown RBP13.81□□□□□ -0.2
SP140-213ENST00000543928 CD93Q9NPY3 652 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 AMACRQ9UHK6 382 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 CACNA1HO95180 2353 aa13.81□□□□□ -0.2
SP140-213ENST00000543928 H0Y858 1186 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 KPNA3O00505 521 aaPredicted RBP13.8□□□□□ -0.2
SP140-213ENST00000543928 CES2O00748 559 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 ZNF185O15231 689 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 MTSS1O43312 755 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 UGT2B4P06133 528 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 CR2P20023 1033 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 C5AR1P21730 350 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 PTPN3P26045 913 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 RBL1P28749 1068 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 TPMTP51580 245 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 METAP1P53582 386 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 AP1S1P61966 158 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 WASHC5Q12768 1159 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 TEX44Q53QW1 395 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.8□□□□□ -0.2
SP140-213ENST00000543928 CNTD1Q8N815 330 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 SLC35B2Q8TB61 432 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 GANCQ8TET4 914 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 C1orf54Q8WWF1 131 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 RLN3Q8WXF3 142 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 VOPP1Q96AW1 172 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 LRIG1Q96JA1 1093 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 C16orf45Q96MC5 204 aaPredicted RBP13.8□□□□□ -0.2
SP140-213ENST00000543928 AGAP3Q96P47 875 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 NUDCD1Q96RS6 583 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 FRMD8P1Q9BZ68 369 aaPredicted RBP13.8□□□□□ -0.2
SP140-213ENST00000543928 CPEB1Q9BZB8 566 aaKnown RBP13.8□□□□□ -0.2
SP140-213ENST00000543928 SCUBE2Q9NQ36 999 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 ITM2CQ9NQX7 267 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 HAUS2Q9NVX0 235 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 ZSCAN32Q9NX65 697 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 DNPEPQ9ULA0 475 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 TTC7AQ9ULT0 858 aaPredicted RBP13.8□□□□□ -0.2
SP140-213ENST00000543928 SCML1Q9UN30 329 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 CYP8B1Q9UNU6 501 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 ATP8A1Q9Y2Q0 1164 aa13.8□□□□□ -0.2
SP140-213ENST00000543928 SAR1BQ9Y6B6 198 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms