RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TTPAP49638 278 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 PPP1R15BQ5SWA1 713 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 FOXR1Q6PIV2 292 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CFAP52Q8N1V2 620 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 C1orf127Q8N9H9 656 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 METTL6Q8TCB7 284 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF296Q8WUU4 475 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 THTPAQ9BU02 230 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 EPN3Q9H201 632 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CDHR5Q9HBB8 845 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CUEDC1Q9NWM3 386 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 DUS2Q9NX74 493 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 TAS2R14Q9NYV8 317 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 OPTCQ9UBM4 332 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ANKDD1BA6NHY2 528 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 PJA2O43164 708 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 GUCY1B2O75343 617 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 EPN2O95208 641 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CCND3P30281 292 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 DPYSL3Q14195 570 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 NYAP1Q6ZVC0 841 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 STRADAQ7RTN6 431 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 C12orf50Q8NA57 414 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 NPLOC4Q8TAT6 608 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ATL1Q8WXF7 558 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 TNFRSF25Q93038 417 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 SNX27Q96L92 541 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 FERD3LQ96RJ6 166 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 KLHL28Q9NXS3 571 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 IFT80Q9P2H3 777 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 GNPTGQ9UJJ9 305 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 EDARQ9UNE0 448 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC27A6Q9Y2P4 619 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MYOM1P52179 1685 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CILPO75339 1184 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 FTH1P02794 183 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ANXA5P08758 320 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC2A4P14672 509 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MAXP61244 160 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 OVGP1Q12889 678 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ATAD3BQ5T9A4 648 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 DET1Q7L5Y6 550 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MILR1Q7Z6M3 343 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ECHDC2Q86YB7 292 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 OR56A4Q8NGH8 313 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 PHF21AQ96BD5 680 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CCT8L2Q96SF2 557 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 FUCA2Q9BTY2 467 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ST6GALNAC4Q9H4F1 302 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ARMC7Q9H6L4 198 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ETNK2Q9NVF9 386 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 SAE1Q9UBE0 346 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 V9GYQ6 96 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 ANKRD65E5RJM6 399 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MDM4O15151 490 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 KCNH1O95259 989 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 IFNA14P01570 189 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CYP1A2P05177 515 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CXCR2P25025 360 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 TRPC1P48995 793 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 NUDT2P50583 147 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CDK18Q07002 472 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MAD2L1Q13257 205 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 UBXN2BQ14CS0 331 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MEA1Q16626 185 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 FOXR2Q6PJQ5 311 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 PRSS55Q6UWB4 352 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 POLNQ7Z5Q5 900 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 RAVER1Q8IY67 606 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 OR52K1Q8NGK4 314 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 B4GALNT2Q8NHY0 566 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 DIS3LQ8TF46 1054 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 EME1Q96AY2 570 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 MAGED4Q96JG8 741 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 BBS4Q96RK4 519 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 GPR88Q9GZN0 384 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 UNC93B1Q9H1C4 597 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 LHX5Q9H2C1 402 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 KRCC1Q9NPI7 259 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 CHRAC1Q9NRG0 131 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 PHPT1Q9NRX4 125 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 RNF186Q9NXI6 227 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 LMO7Q8WWI1 1683 aa6.97□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC25A14O95258 325 aaPredicted RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 PFKMP08237 780 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 LPOP22079 712 aaPredicted RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 GTF2E2P29084 291 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 SSTR1P30872 391 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 GPR15P49685 360 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 COPAP53621 1224 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 RPL7AP62424 266 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 ALDH6A1Q02252 535 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 IRF8Q02556 426 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 FUT11Q495W5 492 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 TJAP1Q5JTD0 557 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 KLHL35Q6PF15 583 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 AFTPHQ6ULP2 937 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 SAPCD2Q86UD0 394 aa6.96□□□□□ -1.29
SRGAP1-206ENST00000543397 GPSM1Q86YR5 675 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms