RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 CYTH1Q15438 398 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 NEK5Q6P3R8 708 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 PIP4P1Q86T03 277 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 ZNF354CQ86Y25 554 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 LZTR1Q8N653 840 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 PPP1R16AQ96I34 528 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 CSPG4P5Q96PW8 444 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 PCDH18Q9HCL0 1135 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 DYRK4Q9NR20 520 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 ETNK2Q9NVF9 386 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 LHX3Q9UBR4 397 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 MFHAS1Q9Y4C4 1052 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 A0A1B0GVT2 93 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 WNT9AO14904 365 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 OPHN1O60890 802 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 CSRP1P21291 193 aaKnown RBP15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 AMPD1P23109 780 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 GKP32189 559 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 MAN1A1P33908 653 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 NUDT1P36639 197 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 ARL4AP40617 200 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 SLC14A1Q13336 389 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 TCEAL1Q15170 157 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 TEAD4Q15561 434 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 UAP1L1Q3KQV9 507 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 PPM1JQ5JR12 505 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 ATXN7L2Q5T6C5 722 aaPredicted RBP15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 IL27RAQ6UWB1 636 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 OR6K2Q8NGY2 324 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 SLC35G2Q8TBE7 412 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 GDAP1L1Q96MZ0 367 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 SLC6A18Q96N87 628 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 OSBPL1AQ9BXW6 950 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 ZDHHC6Q9H6R6 413 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 RCOR3Q9P2K3 495 aaPredicted RBP15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 UBA2Q9UBT2 640 aaPredicted RBP15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 INTUQ9ULD6 942 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 ANKRD6Q9Y2G4 727 aa15.69■□□□□ 0.1
ECHDC2-223ENST00000542552 TP53BP1Q12888 1972 aaPredicted RBP15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 TMEM131Q92545 1883 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 A0A1W2PR77 199 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 MED19A0JLT2 244 aaPredicted RBP15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 KRIT1O00522 736 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 VILLO15195 856 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 AP1G1O43747 822 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 RNGTTO60942 597 aaKnown RBP15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 KCNK5O95279 499 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 LCA5LO95447 670 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 IGSF6O95976 241 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 WNT1P04628 370 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 ADRB3P13945 408 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 CD59P13987 128 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 CTSKP43235 329 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 NEK3P51956 506 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 TAS2R40P59535 323 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 RHOAP61586 193 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 IL10RBQ08334 325 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 HADHQ16836 314 aaKnown RBP15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 KIF19Q2TAC6 998 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 HLA-BQ31612 363 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 ATP13A4Q4VNC1 1196 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 ZNF805Q5CZA5 627 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 ARHGAP36Q6ZRI8 547 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 PARS2Q7L3T8 475 aaKnown RBP15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 PRPF39Q86UA1 669 aaKnown RBP15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 TP53INP2Q8IXH6 220 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 RHOT2Q8IXI1 618 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 NETO2Q8NC67 525 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 CPEB1Q9BZB8 566 aaKnown RBP15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 IL21RQ9HBE5 538 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 DMTF1Q9Y222 760 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 SNX11Q9Y5W9 270 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 PCNX2A6NKB5 2137 aa15.68■□□□□ 0.1
ECHDC2-223ENST00000542552 C16orf96A6NNT2 1141 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 CD48P09326 243 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 ZNF883P0CG24 379 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 FECHP22830 423 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 ARHGAP25P42331 645 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 CDH6P55285 790 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 DPYSL3Q14195 570 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 ZNF284Q2VY69 593 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 TMEM259Q4ZIN3 620 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 NAPEPLDQ6IQ20 393 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 TMCO3Q6UWJ1 677 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 LAYNQ6UX15 382 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 GDPD4Q6W3E5 623 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 HORMAD1Q86X24 394 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 RYBPQ8N488 228 aaPredicted RBP15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 SERAC1Q96JX3 654 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 GAREM1Q9H706 876 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 IPO11Q9UI26 975 aaKnown RBP15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 ZFR2Q9UPR6 939 aaKnown RBP15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 FADS3Q9Y5Q0 445 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 CABIN1Q9Y6J0 2220 aa15.67■□□□□ 0.1
ECHDC2-223ENST00000542552 SPEGQ15772 3267 aa15.66■□□□□ 0.1
ECHDC2-223ENST00000542552 A0A1W2PQU0 124 aa15.66■□□□□ 0.1
ECHDC2-223ENST00000542552 DFFAO00273 331 aa15.66■□□□□ 0.1
ECHDC2-223ENST00000542552 INSIG1O15503 277 aa15.66■□□□□ 0.1
ECHDC2-223ENST00000542552 SPINT1O43278 529 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms