RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 THRAP10827 490 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 RALBP11234 206 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 NCAM1P13591 858 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 IDO1P14902 403 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 ACADVLP49748 655 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 THOP1P52888 689 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 NOTUMQ6P988 496 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 TTC23LQ6PF05 361 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 DHRS4L2Q6PKH6 230 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 PRR23CQ6ZRP0 262 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 NUDT18Q6ZVK8 323 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 RAB44Q7Z6P3 723 aaPredicted RBP5.3□□□□□ -1.56
PROM1-220ENST00000540805 ACOT1Q86TX2 421 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 C10orf107Q8IVU9 208 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 NAT16Q8N8M0 369 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 BHLHE22Q8NFJ8 381 aaPredicted RBP5.3□□□□□ -1.56
PROM1-220ENST00000540805 SLC7A14Q8TBB6 771 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 GPRASP2Q96D09 838 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 DEFB118Q96PH6 123 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 PKP2Q99959 881 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 SLC2A11Q9BYW1 496 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 MUC3BQ9H195 1237 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 MROH8Q9H579 483 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 PLAC1Q9HBJ0 212 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 TBC1D23Q9NUY8 699 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 PRMT7Q9NVM4 692 aaPredicted RBP5.3□□□□□ -1.56
PROM1-220ENST00000540805 SFMBT1Q9UHJ3 866 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 LSM7Q9UK45 103 aaKnown RBP5.3□□□□□ -1.56
PROM1-220ENST00000540805 PCDHA11Q9Y5I1 949 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 TLL2Q9Y6L7 1015 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 CNTNAP2Q9UHC6 1331 aa5.3□□□□□ -1.56
PROM1-220ENST00000540805 E2F8A0AVK6 867 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 E5RI56 91 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 TPP1O14773 563 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 ITGBL1O95965 494 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 GSRP00390 522 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 XRCC1P18887 633 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 MX2P20592 715 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 MIPP30301 263 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 CDH5P33151 784 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 GNL1P36915 607 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 MLLT3P42568 568 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 ALDH3B2P48448 385 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 YWHAHQ04917 246 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 MMRN1Q13201 1228 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 TAF5Q15542 800 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 TARBP2Q15633 366 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 PTPN20Q4JDL3 420 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 KRT80Q6KB66 452 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 LILRA2Q8N149 483 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 EMC1Q8N766 993 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 KYQ8NBH2 561 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 CMASQ8NFW8 434 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 ULK4Q96C45 1275 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 VPS50Q96JG6 964 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 FEM1CQ96JP0 617 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 CDRT15Q96T59 188 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 EBNA1BP2Q99848 306 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 NAA50Q9GZZ1 169 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 CAAP1Q9H8G2 361 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 BFARQ9NZS9 450 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 ARHGAP28Q9P2N2 729 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 DCDC2Q9UHG0 476 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 NUDT5Q9UKK9 219 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 USP18Q9UMW8 372 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 CDY2AQ9Y6F7 541 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 CDY1Q9Y6F8 540 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 PRSS51A0A1B0GVH4 220 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 MANSC4A6NHS7 340 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 TBKBP1A7MCY6 615 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 ZNF195O14628 629 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 ARIH2O95376 493 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 HSPA4LO95757 839 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 TRUB2O95900 331 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 HSPA1AP0DMV8 641 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 HSPA1BP0DMV9 641 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 CCDC130P13994 396 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 PIK3R1P27986 724 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 AKT1P31749 480 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 SERPINB5P36952 375 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 HARS2P49590 506 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 TPI1P60174 286 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 SP3Q02447 781 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 FAM214AQ32MH5 1076 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 XRRA1Q6P2D8 792 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 SETD3Q86TU7 594 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 SNX32Q86XE0 403 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.29□□□□□ -1.56
PROM1-220ENST00000540805 CHERPQ8IWX8 916 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 WDTC1Q8N5D0 677 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 OR5B17Q8NGF7 314 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 PBXIP1Q96AQ6 731 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 EME1Q96AY2 570 aa5.29□□□□□ -1.56
PROM1-220ENST00000540805 PPWD1Q96BP3 646 aaKnown RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 LENG8Q96PV6 779 aaPredicted RBP5.29□□□□□ -1.56
PROM1-220ENST00000540805 CDH19Q9H159 772 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms