RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FAM131BQ86XD5 332 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 TPCN2Q8NHX9 752 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 IFI44Q8TCB0 444 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 ARHGEF26Q96DR7 871 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 WBP1Q96G27 269 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 CFAP57Q96MR6 1250 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 KLF6Q99612 283 aaPredicted RBP12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 C1QTNF2Q9BXJ5 285 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 IPO11Q9UI26 975 aaKnown RBP12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 FCF1Q9Y324 198 aaKnown RBP12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 FHOD1Q9Y613 1164 aa12.22□□□□□ -0.45
CBX3P4-202ENST00000540428 EME2A4GXA9 379 aaPredicted RBP12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 GOLGA8SH3BPF8 625 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 AQP9O43315 295 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 GSRP00390 522 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 PFN3P60673 137 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 NOMO3P69849 1222 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 CXADRP78310 365 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 PDE1CQ14123 709 aaPredicted RBP12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 ISXQ2M1V0 245 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF805Q5CZA5 627 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 MANEALQ5VSG8 457 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 TAF3Q5VWG9 929 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 NOP9Q86U38 636 aaKnown RBP12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF677Q86XU0 584 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 DRC7Q8IY82 874 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 MAPK15Q8TD08 544 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 EPS8L1Q8TE68 723 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 BTN2A2Q8WVV5 523 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 ARHGEF2Q92974 986 aaKnown RBP12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 TBATAQ96M53 351 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 NAA15Q9BXJ9 866 aaKnown RBP12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 OSBPL1AQ9BXW6 950 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 TM6SF2Q9BZW4 377 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 OSBPL2Q9H1P3 480 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 MAGEH1Q9H213 219 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 ZDHHC6Q9H6R6 413 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 THSD1Q9NS62 852 aa12.21□□□□□ -0.45
CBX3P4-202ENST00000540428 MYLKQ15746 1914 aa12.21□□□□□ -0.46
CBX3P4-202ENST00000540428 DOCK9Q9BZ29 2069 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 IGLON5A6NGN9 336 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 C16orf96A6NNT2 1141 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 TOR1BO14657 336 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 TCEA3O75764 348 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 NEBLO76041 1014 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 POP4O95707 220 aaKnown RBP12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 MYF5P13349 255 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 UCHL3P15374 230 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 RHOQP17081 205 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 JUNDP17535 347 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 ERCC5P28715 1186 aaPredicted RBP12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 ADRA1BP35368 520 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 ACVRL1P37023 503 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 ABL2P42684 1182 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 SNRPD1P62314 119 aaKnown RBP12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 RHDQ02161 417 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 POLD3Q15054 466 aaPredicted RBP12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 C2CD6Q53TS8 623 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 NLRP14Q86W24 1093 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 ZNF843Q8N446 348 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 OR2AP1Q8NGE2 309 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 WDR48Q8TAF3 677 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 KCNE4Q8WWG9 221 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 IL12RB2Q99665 862 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 STK33Q9BYT3 514 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 DPH1Q9BZG8 443 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 CAAP1Q9H8G2 361 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 ASCL3Q9NQ33 180 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 TMEM248Q9NWD8 314 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 SPASTQ9UBP0 616 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 OR12D3Q9UGF7 316 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 DACH1Q9UI36 760 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 KLF15Q9UIH9 416 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 HPCAL4Q9UM19 191 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 PCDHGA8Q9Y5G5 932 aa12.2□□□□□ -0.46
CBX3P4-202ENST00000540428 ZSCAN5CA6NGD5 496 aaPredicted RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 F8VZ95 297 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 NEMP1O14524 444 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 AREL1O15033 823 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 SPINT1O43278 529 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 RAMP2O60895 175 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 CYP1A1P04798 512 aaPredicted RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 MMEP08473 750 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 TGM2P21980 687 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 MMP8P22894 467 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 SDC4P31431 198 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 MLLT3P42568 568 aaPredicted RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 RPIAP49247 311 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 YPEL5P62699 121 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 ATP11AP98196 1134 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 CFHR1Q03591 330 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 EIF2B5Q13144 721 aaKnown RBP12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 NR0B2Q15466 257 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 NAA35Q5VZE5 725 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 GUSBP11Q6P575 273 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 PCSK4Q6UW60 755 aa12.19□□□□□ -0.46
CBX3P4-202ENST00000540428 STRADAQ7RTN6 431 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms