RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 LATO43561 262 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 PRAMEF11O60813 436 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 GSRP00390 522 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 WNT1P04628 370 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 SYPP08247 313 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 KCNA4P22459 653 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 SSR1P43307 286 aaKnown RBP15.31■□□□□ 0.04
UBE3B-212ENST00000540230 AFF3P51826 1226 aaKnown RBP15.31■□□□□ 0.04
UBE3B-212ENST00000540230 MMRN1Q13201 1228 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 INO80DQ53TQ3 878 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-212ENST00000540230 ERN2Q76MJ5 926 aaKnown RBP15.31■□□□□ 0.04
UBE3B-212ENST00000540230 PARS2Q7L3T8 475 aaKnown RBP15.31■□□□□ 0.04
UBE3B-212ENST00000540230 PLPP6Q8IY26 295 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 KDM4CQ9H3R0 1056 aa15.31■□□□□ 0.04
UBE3B-212ENST00000540230 TMEM110-MUSTN1A8MSY1 372 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 DFFAO00273 331 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 KRIT1O00522 736 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 IL4RP24394 825 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 ITGB7P26010 798 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 ARL4AP40617 200 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 RGRP47804 291 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 GRIA4P48058 902 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 ARSEP51690 589 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 CDH6P55285 790 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 RHOAP61586 193 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 SNRPD1P62314 119 aaKnown RBP15.3■□□□□ 0.04
UBE3B-212ENST00000540230 KIF19Q2TAC6 998 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 SLC35G2Q8TBE7 412 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 KLK6Q92876 244 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 MRFAP1L1Q96HT8 127 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 HDAC8Q9BY41 377 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 DYRK4Q9NR20 520 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 DNAAF2Q9NVR5 837 aaKnown RBP15.3■□□□□ 0.04
UBE3B-212ENST00000540230 UBA2Q9UBT2 640 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-212ENST00000540230 ZFR2Q9UPR6 939 aaKnown RBP15.3■□□□□ 0.04
UBE3B-212ENST00000540230 SNX11Q9Y5W9 270 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 NCOR2Q9Y618 2525 aa15.3■□□□□ 0.04
UBE3B-212ENST00000540230 A0A1W2PR77 199 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 ARHGAP42A6NI28 874 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 KCNK3O14649 394 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 RNGTTO60942 597 aaKnown RBP15.29■□□□□ 0.04
UBE3B-212ENST00000540230 UGT2B4P06133 528 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 ADRB3P13945 408 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 ABL2P42684 1182 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 NEK3P51956 506 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 ZNF135P52742 658 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-212ENST00000540230 RACK1P63244 317 aaKnown RBP15.29■□□□□ 0.04
UBE3B-212ENST00000540230 MESDQ14696 234 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 MYLK3Q32MK0 819 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 TRIM69Q86WT6 500 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 DEFB124Q8NES8 71 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 FAM71BQ8TC56 605 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 CASKIN2Q8WXE0 1202 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 PPP1R16AQ96I34 528 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 GDAP1L1Q96MZ0 367 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 GAREM1Q9H706 876 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 PREBQ9HCU5 417 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 DONSONQ9NYP3 566 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 GGT7Q9UJ14 662 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 TFR2Q9UP52 801 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 CA5BQ9Y2D0 317 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 ANKRD6Q9Y2G4 727 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 FNDC3AQ9Y2H6 1198 aaKnown RBP15.29■□□□□ 0.04
UBE3B-212ENST00000540230 SHROOM3Q8TF72 1996 aa15.29■□□□□ 0.04
UBE3B-212ENST00000540230 ANKRD36A6QL64 1941 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 A0A1W2PQU0 124 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 SPINT1O43278 529 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 OPHN1O60890 802 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 KCNK5O95279 499 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 PIGNO95427 931 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 CD59P13987 128 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 DPYSL3Q14195 570 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 KRT81Q14533 505 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 HADHQ16836 314 aaKnown RBP15.28■□□□□ 0.04
UBE3B-212ENST00000540230 HLA-BQ31612 363 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 LRRC73Q5JTD7 316 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 SEL1L3Q68CR1 1132 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 PSAPL1Q6NUJ1 521 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 TSEN2Q8NCE0 465 aaKnown RBP15.28■□□□□ 0.04
UBE3B-212ENST00000540230 SERAC1Q96JX3 654 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 KLHL32Q96NJ5 620 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 MYOCQ99972 504 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 ZDHHC5Q9C0B5 715 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 AASDHPPTQ9NRN7 309 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 IPO11Q9UI26 975 aaKnown RBP15.28■□□□□ 0.04
UBE3B-212ENST00000540230 ITM2BQ9Y287 266 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 FADS3Q9Y5Q0 445 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 TRPM6Q9BX84 2022 aa15.28■□□□□ 0.04
UBE3B-212ENST00000540230 C16orf96A6NNT2 1141 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 MUSKO15146 869 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 POP4O95707 220 aaKnown RBP15.27■□□□□ 0.04
UBE3B-212ENST00000540230 IGSF6O95976 241 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 PRLRP16471 622 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 CTSKP43235 329 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 NOVA1P51513 510 aaKnown RBP15.27■□□□□ 0.04
UBE3B-212ENST00000540230 ZNF805Q5CZA5 627 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 TMCO3Q6UWJ1 677 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 ADAT2Q7Z6V5 191 aaKnown RBP15.27■□□□□ 0.04
UBE3B-212ENST00000540230 PIP4P1Q86T03 277 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 RFFLQ8WZ73 363 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms