RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TTC36A6NLP5 189 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 PDGFBP01127 241 aaPredicted RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 IFNB1P01574 187 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 DCNP07585 359 aaKnown RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 HOXB2P14652 356 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 CES1P23141 567 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 WASHC5Q12768 1159 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 CWF19L1Q69YN2 538 aaKnown RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 PID1Q7Z2X4 250 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 RYBPQ8N488 228 aaPredicted RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 SPATA4Q8NEY3 305 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 TEKT5Q96M29 485 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 MGME1Q9BQP7 344 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 CEP41Q9BYV8 373 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 CHRDQ9H2X0 955 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 LHX3Q9UBR4 397 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 ATP8A1Q9Y2Q0 1164 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 TECTAO75443 2155 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 C5orf60A6NFR6 353 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 ZBTB24O43167 697 aaPredicted RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 ADAM23O75077 832 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 ZNF821O75541 412 aaPredicted RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 HLA-DQB2P05538 268 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 AOC1P19801 751 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 MAPK8P45983 427 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 CSNK1DP48730 415 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 SCNN1BP51168 640 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 CLCN5P51795 746 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 HNRNPH2P55795 449 aaKnown RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 C9orf64Q5T6V5 341 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 ITPRIPL1Q6GPH6 555 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 SYT13Q7L8C5 426 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 ZNF572Q7Z3I7 529 aaPredicted RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 KLHL7Q8IXQ5 586 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 ZNF567Q8N184 647 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 PBXIP1Q96AQ6 731 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 RTP4Q96DX8 246 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 DDX47Q9H0S4 455 aaKnown RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 FBRSQ9HAH7 460 aa15.65■□□□□ 0.1
DDB1-216ENST00000539739 HECAQ9UBI9 543 aaPredicted RBP15.65■□□□□ 0.1
DDB1-216ENST00000539739 OPHN1O60890 802 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 RNASEH1O60930 286 aaKnown RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 SIN3BO75182 1162 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 GCATO75600 419 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 POP4O95707 220 aaKnown RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 GAS8O95995 478 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 GDF10P55107 478 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 MAXP61244 160 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 CAMK2GQ13555 558 aaPredicted RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 ELAVL3Q14576 367 aaKnown RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 P3H1Q32P28 736 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 RALGPS1Q5JS13 557 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 ANKRD20A2Q5SQ80 823 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 ATXN7L2Q5T6C5 722 aaPredicted RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 ANKRD20A1Q5TYW2 823 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 ANKRD20A3Q5VUR7 823 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 TTC27Q6P3X3 843 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 DPY19L3Q6ZPD9 716 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 ARHGEF18Q6ZSZ5 1173 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 DSG4Q86SJ6 1040 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 SRLQ86TD4 932 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 PGBD5Q8N414 524 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 SPEM1Q8N4L4 309 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 CNTD1Q8N815 330 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 CEP112Q8N8E3 955 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 OR2A12Q8NGT7 310 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 OR8D1Q8WZ84 308 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 EXOC2Q96KP1 924 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 SPATA13Q96N96 652 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 HEPHQ9BQS7 1158 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 COL25A1Q9BXS0 654 aaPredicted RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 MTG2Q9H4K7 406 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 POLMQ9NP87 494 aaPredicted RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 PRSS16Q9NQE7 514 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 PCYOX1Q9UHG3 505 aa15.64■□□□□ 0.09
DDB1-216ENST00000539739 V9GYY5 206 aaPredicted RBP15.64■□□□□ 0.09
DDB1-216ENST00000539739 MUSKO15146 869 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 ALOX15BO15296 676 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 SLC34A2O95436 690 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 ECEL1O95672 775 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 CCNHP51946 323 aaPredicted RBP15.63■□□□□ 0.09
DDB1-216ENST00000539739 DGKEP52429 567 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 AP1S1P61966 158 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 GPS2Q13227 327 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 GAS6Q14393 721 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 GRM3Q14832 879 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 CRY1Q16526 586 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 MYLK3Q32MK0 819 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 PKN3Q6P5Z2 889 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 C4orf22Q6V702 233 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 BMP8AQ7Z5Y6 402 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 STK40Q8N2I9 435 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 CCDC110Q8TBZ0 833 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 ZNF419Q96HQ0 510 aaPredicted RBP15.63■□□□□ 0.09
DDB1-216ENST00000539739 NUDCD1Q96RS6 583 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 SEMA3CQ99985 751 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 GLOD4Q9HC38 313 aa15.63■□□□□ 0.09
DDB1-216ENST00000539739 CTAGE15A4D2H0 777 aa15.62■□□□□ 0.09
DDB1-216ENST00000539739 INSIG1O15503 277 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms