RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 RFPL2O75678 378 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 CXCL14O95715 111 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 DHRS4L1P0CG22 281 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 DNAJB1P25685 340 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 MZF1P28698 734 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 HTR7P34969 479 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 GP5P40197 560 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 GEMP55040 296 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 GNA12Q03113 381 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 ANO4Q32M45 955 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 N4BP2L1Q5TBK1 243 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 PLPP4Q5VZY2 271 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 ATG14Q6ZNE5 492 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 CMTR2Q8IYT2 770 aaKnown RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 FITM2Q8N6M3 262 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 ST13P5Q8NFI4 369 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 ALKBH8Q96BT7 664 aaKnown RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 KLF16Q9BXK1 252 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-205ENST00000538545 SLC25A51Q9H1U9 297 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 SNX15Q9NRS6 342 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 TMEM216Q9P0N5 145 aa14.31□□□□□ -0.12
ACTN1-205ENST00000538545 HDCP19113 662 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 NPY2RP49146 381 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 ZNF33AQ06730 810 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 MPP3Q13368 585 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 GRM3Q14832 879 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 TPGS2Q68CL5 300 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 PKN3Q6P5Z2 889 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 CARNMT1Q8N4J0 409 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 MYRFLQ96LU7 910 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 RBBP8Q99708 897 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 NAT9Q9BTE0 207 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 SSU72Q9NP77 194 aaKnown RBP14.3□□□□□ -0.12
ACTN1-205ENST00000538545 SLC39A10Q9ULF5 831 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 CLEC4EQ9ULY5 219 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 CCT8L1PA6NM43 557 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 CCL16O15467 120 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 UBOX5O94941 541 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 AHSGP02765 367 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 F11P03951 625 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 SCNN1BP51168 640 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 ARSDP51689 593 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 SLC18A1P54219 525 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 EPHB3P54753 998 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 CHI3L2Q15782 390 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 TPGS1Q6ZTW0 290 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 MFSD6LQ8IWD5 586 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 ANKS4BQ8N8V4 417 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 KIFC1Q9BW19 673 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 PCDHB12Q9Y5F1 795 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 ANKRD36A6QL64 1941 aa14.3□□□□□ -0.12
ACTN1-205ENST00000538545 LILRB3O75022 631 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 PRSS56P0CW18 603 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 SP100P23497 879 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 RFC2P35250 354 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 CCNFP41002 786 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 ZNF235Q14590 738 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 PCID2Q5JVF3 399 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 SIRPB2Q5JXA9 342 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 TRPM8Q7Z2W7 1104 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 LINC00523Q86TU6 105 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 CCNJLQ8IV13 435 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 FIBCD1Q8N539 461 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 BLOC1S5Q8TDH9 187 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 TMEM106CQ9BVX2 250 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 ZBP1Q9H171 429 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 PDFQ9HBH1 243 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 ATP13A1Q9HD20 1204 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 IL23AQ9NPF7 189 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 TCAF1Q9Y4C2 921 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 OBSL1O75147 1896 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 A0A0G2JND7 137 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 PRAMEF11O60813 436 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 TBL1XO60907 577 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 LYPLA1O75608 230 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 GSRP00390 522 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 C1RP00736 705 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 CKMP06732 381 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 CCR2P41597 374 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 GLRBP48167 497 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 ADGRF1Q5T601 910 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 ZNF697Q5TEC3 545 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 SNX30Q5VWJ9 437 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 RNF219Q5W0B1 726 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 PTAR1Q7Z6K3 402 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 PDZD8Q8NEN9 1154 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 OR6K2Q8NGY2 324 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 SH3RF2Q8TEC5 729 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 VPS39Q96JC1 886 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 NDNQ99608 321 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 TCF25Q9BQ70 676 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 CORO1BQ9BR76 489 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 OXCT2Q9BYC2 517 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 NOD2Q9HC29 1040 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 CPSF2Q9P2I0 782 aaKnown RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 PRKAG3Q9UGI9 489 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 TRIM33Q9UPN9 1127 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms