RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FUT2Q10981 343 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 COL9A3Q14050 684 aaPredicted RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 CRYMQ14894 314 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 HYIQ5T013 277 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FAM45BPQ6NSW5 357 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ANKS1BQ7Z6G8 1248 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FAM45AQ8TCE6 357 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FIG4Q92562 907 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 DHX33Q9H6R0 707 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 SLC24A2Q9UI40 661 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ASF1AQ9Y294 204 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 IRS2Q9Y4H2 1338 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 EPHB6O15197 1021 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 UBDO15205 165 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 PAPSS1O43252 624 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 CLDN11O75508 207 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ATP6V1C1P21283 382 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 MAD2L1Q13257 205 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 CBX2Q14781 532 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 SH3D19Q5HYK7 790 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 C16orf87Q6PH81 154 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ZCCHC23Q6ZST2 131 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 PHYKPLQ8IUZ5 450 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TEX9Q8N6V9 391 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 C4orf32Q8N8J7 132 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 KCTD15Q96SI1 283 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 USE1Q9NZ43 259 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 CLIC5Q9NZA1 410 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 PRKAG3Q9UGI9 489 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 FCF1Q9Y324 198 aaKnown RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 STARD13Q9Y3M8 1113 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 IGLV3-22A0A075B6J6 115 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 CCDC154A6NI56 674 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 MAGEC1O60732 1142 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 CILPO75339 1184 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 THRAP10827 490 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 LPOP22079 712 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 GDI1P31150 447 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TTPAP49638 278 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 VEGFBP49765 207 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GATMP50440 423 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TAS2R40P59535 323 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 RGS1Q08116 209 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TERF2Q15554 542 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 KCTD19Q17RG1 926 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 C16orf46Q6P387 395 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 DNAJC14Q6Y2X3 702 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 CCDC81Q6ZN84 652 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 XYLT1Q86Y38 959 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GATAD2AQ86YP4 633 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GLMNQ92990 594 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ACBD6Q9BR61 282 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TMBIM4Q9HC24 238 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 IMPAD1Q9NX62 359 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SYBUQ9NX95 663 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 IL1RAPL1Q9NZN1 696 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SLC27A6Q9Y2P4 619 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 FFAR3O14843 346 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GPR42O15529 346 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 LIASO43766 372 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 CCDC166P0CW27 439 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 UMPSP11172 480 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 COX7A2P14406 83 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GJA1P17302 382 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ATP6V1B2P21281 511 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 NTSP30990 170 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 DGKGP49619 791 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 SP2Q02086 613 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GSTA3Q16772 222 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 HERVK_113Q902F9 699 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TADA1Q96BN2 335 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 PRDM16Q9HAZ2 1276 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 N6AMT1Q9Y5N5 214 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 LTBP3Q9NS15 1303 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 CHADO15335 359 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TLX1P31314 330 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 LILRA4P59901 499 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GAD2Q05329 585 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TEAD4Q15561 434 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 XKR6Q5GH73 641 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 NYAP1Q6ZVC0 841 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TAF8Q7Z7C8 310 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 P3H2Q8IVL5 708 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 GPR156Q8NFN8 814 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 ZNF670Q9BS34 389 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 POLMQ9NP87 494 aaPredicted RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 EXOSC4Q9NPD3 245 aaKnown RBP5.41□□□□□ -1.54
LRP6-203ENST00000538239 MYBPHLA2RUH7 354 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 KPNA5O15131 536 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 TM9SF1O15321 606 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 FFAR2O15552 330 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 HS6ST1O60243 411 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 IFNA14P01570 189 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 IRF8Q02556 426 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 PTPRNQ16849 979 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 BMT2Q1RMZ1 405 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 VITQ6UXI7 678 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 RIPOR1Q6ZS17 1223 aa5.41□□□□□ -1.54
LRP6-203ENST00000538239 OTOP3Q7RTS5 596 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms