RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ADH1BP00325 375 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 C5AR1P21730 350 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 ACSL1P33121 698 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 MAN1A1P33908 653 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 RECQLP46063 649 aaPredicted RBP18.29■□□□□ 0.52
CCDC61-201ENST00000536603 NOP2P46087 812 aaKnown RBP18.29■□□□□ 0.52
CCDC61-201ENST00000536603 NDST2P52849 883 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 GEMIN4P57678 1058 aaKnown RBP18.29■□□□□ 0.52
CCDC61-201ENST00000536603 SFSWAPQ12872 951 aaKnown RBP18.29■□□□□ 0.52
CCDC61-201ENST00000536603 GRIK2Q13002 908 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 TCEAL1Q15170 157 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 C19orf48Q6RUI8 117 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 DSG4Q86SJ6 1040 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 NETO2Q8NC67 525 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 ACRBPQ8NEB7 543 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 CSPG4P5Q96PW8 444 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 OMDQ99983 421 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 DESI2Q9BSY9 194 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 ZDHHC5Q9C0B5 715 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 BTBD1Q9H0C5 482 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 LUC7LQ9NQ29 371 aaKnown RBP18.29■□□□□ 0.52
CCDC61-201ENST00000536603 SERGEFQ9UGK8 458 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 PPM1HQ9ULR3 514 aa18.29■□□□□ 0.52
CCDC61-201ENST00000536603 A0A0U1RQJ8 604 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 ZSCAN5CA6NGD5 496 aaPredicted RBP18.28■□□□□ 0.52
CCDC61-201ENST00000536603 ARHGAP42A6NI28 874 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 TAF4O00268 1085 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 GJB3O75712 270 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 KRT7P08729 469 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 CD48P09326 243 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 CHRNA3P32297 505 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 PAPOLAP51003 745 aaKnown RBP18.28■□□□□ 0.52
CCDC61-201ENST00000536603 METAP1P53582 386 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 POM121L1PQ3SYA9 428 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 CARD16Q5EG05 197 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 ZFYVE27Q5T4F4 411 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 FAM46CQ5VWP2 391 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 DPY19L3Q6ZPD9 716 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 USP30Q70CQ3 517 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 ZCCHC9Q8N567 271 aaKnown RBP18.28■□□□□ 0.52
CCDC61-201ENST00000536603 AADATQ8N5Z0 425 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 PCDH20Q8N6Y1 951 aaKnown RBP18.28■□□□□ 0.52
CCDC61-201ENST00000536603 NPWQ8N729 165 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 KCTD6Q8NC69 237 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 CHST14Q8NCH0 376 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 CCDC112Q8NEF3 446 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 PIP4K2CQ8TBX8 421 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 FAM71BQ8TC56 605 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 ADAMTS14Q8WXS8 1223 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 NEUROG2Q9H2A3 272 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 ETNK2Q9NVF9 386 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 KLHL11Q9NVR0 708 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 MFHAS1Q9Y4C4 1052 aa18.28■□□□□ 0.52
CCDC61-201ENST00000536603 C1QTNF3-AMACRE9PGA6 284 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 DFFAO00273 331 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 IPO7O95373 1038 aaKnown RBP18.27■□□□□ 0.52
CCDC61-201ENST00000536603 CTSLP07711 333 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 IL4RP24394 825 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 ARSEP51690 589 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 MMRN1Q13201 1228 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 NUMA1Q14980 2115 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 AFMIDQ63HM1 303 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 ARHGAP12Q8IWW6 846 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 LZTR1Q8N653 840 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 CADM4Q8NFZ8 388 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 TSC1Q92574 1164 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 ISG20Q96AZ6 181 aaKnown RBP18.27■□□□□ 0.52
CCDC61-201ENST00000536603 CALN1Q9BXU9 219 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 TM6SF2Q9BZW4 377 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 CCDC86Q9H6F5 360 aaKnown RBP18.27■□□□□ 0.52
CCDC61-201ENST00000536603 C6orf106Q9H6K1 298 aaPredicted RBP18.27■□□□□ 0.52
CCDC61-201ENST00000536603 SGK2Q9HBY8 427 aa18.27■□□□□ 0.52
CCDC61-201ENST00000536603 ADAMTS20P59510 1910 aa18.27■□□□□ 0.51
CCDC61-201ENST00000536603 BAHCC1Q9P281 2608 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 CACNA1EQ15878 2313 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 RCCD1A6NED2 376 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 J3KR12 359 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 PLK4O00444 970 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 ARHGAP6O43182 974 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 SEMA4FO95754 770 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 CER1O95813 267 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 DPYSL3Q14195 570 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 PDK2Q15119 407 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 INO80DQ53TQ3 878 aaPredicted RBP18.26■□□□□ 0.51
CCDC61-201ENST00000536603 ARSIQ5FYB1 569 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 DCAF12L1Q5VU92 463 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 TMCO3Q6UWJ1 677 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.26■□□□□ 0.51
CCDC61-201ENST00000536603 TP53INP2Q8IXH6 220 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 RYBPQ8N488 228 aaPredicted RBP18.26■□□□□ 0.51
CCDC61-201ENST00000536603 TMIEQ8NEW7 156 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 GRIN3AQ8TCU5 1115 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 CASKIN2Q8WXE0 1202 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 HEPHQ9BQS7 1158 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 GAREM1Q9H706 876 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 RCOR3Q9P2K3 495 aaPredicted RBP18.26■□□□□ 0.51
CCDC61-201ENST00000536603 IL36AQ9UHA7 158 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 HYOU1Q9Y4L1 999 aa18.26■□□□□ 0.51
CCDC61-201ENST00000536603 NYNRINQ9P2P1 1898 aaKnown RBP18.25■□□□□ 0.51
CCDC61-201ENST00000536603 FAM47DPA6NHR8 397 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms