RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 FAM86C1Q9NVL1 165 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 RBM22Q9NW64 420 aaKnown RBP eCLIP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 SERGEFQ9UGK8 458 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 IL36AQ9UHA7 158 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 MBD1Q9UIS9 605 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 PCDHGA2Q9Y5H1 932 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 IGHV1OR15-9A0A0B4J2B8 117 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 A0A1W2PP55 124 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 KRIT1O00522 736 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 FANCGO15287 622 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 POP4O95707 220 aaKnown RBP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 JCHAINP01591 159 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 IGLV3-19P01714 112 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 DNTTP04053 509 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 HLA-DQB2P05538 268 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 CCNB1P14635 433 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 C5AR1P21730 350 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 BCKDHBP21953 392 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 DRD3P35462 400 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 CSNK1DP48730 415 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 RENBPP51606 427 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 PTPN5P54829 565 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 GNG11P61952 73 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 IFI35P80217 286 aaPredicted RBP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 ZBTB16Q05516 673 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 ZNF33AQ06730 810 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 NSUN2Q08J23 767 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 ZNF235Q14590 738 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 IHHQ14623 411 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 USP39Q53GS9 565 aaKnown RBP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 BZW1Q7L1Q6 419 aaKnown RBP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 ADAT2Q7Z6V5 191 aaKnown RBP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 DSG4Q86SJ6 1040 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 SRLQ86TD4 932 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 FAM124AQ86V42 546 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 TMIEQ8NEW7 156 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 NSMCE1Q8WV22 266 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 TFB1MQ8WVM0 346 aaKnown RBP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 QKIQ96PU8 341 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMEM258-202ENST00000535042 IL12RB2Q99665 862 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 MGME1Q9BQP7 344 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 BRD8Q9H0E9 1235 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 NT5MQ9NPB1 228 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 HCN4Q9Y3Q4 1203 aa13.31□□□□□ -0.28
TMEM258-202ENST00000535042 C1QTNF3-AMACRE9PGA6 284 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 KPNA3O00505 521 aaPredicted RBP13.3□□□□□ -0.28
TMEM258-202ENST00000535042 CEP104O60308 925 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 ZNF217O75362 1048 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 RPP40O75818 363 aaKnown RBP13.3□□□□□ -0.28
TMEM258-202ENST00000535042 PIGNO95427 931 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 ADH1BP00325 375 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 PRNPP04156 253 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 ACADMP11310 421 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 SCNN1BP51168 640 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 EIF3EP60228 445 aaKnown RBP13.3□□□□□ -0.28
TMEM258-202ENST00000535042 WASHC5Q12768 1159 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 XRCC4Q13426 336 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 SIX1Q15475 284 aaPredicted RBP13.3□□□□□ -0.28
TMEM258-202ENST00000535042 SLC45A4Q5BKX6 768 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 NCEH1Q6PIU2 408 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 HDDC3Q8N4P3 179 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 ATOH1Q92858 354 aaPredicted RBP13.3□□□□□ -0.28
TMEM258-202ENST00000535042 NEUROG2Q9H2A3 272 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 FBXL12Q9NXK8 326 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
TMEM258-202ENST00000535042 HACD1B0YJ81 288 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 H7C0C1 242 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 RNASEH2AO75792 299 aaKnown RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 UGT2B4P06133 528 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 RBP3P10745 1247 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 MSNP26038 577 aaKnown RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 PTPN3P26045 913 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 RBL1P28749 1068 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 ACSL1P33121 698 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 CNR2P34972 360 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 HSPA9P38646 679 aaKnown RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 ATP5OP48047 213 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 DSC2Q02487 901 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 NIPAL4Q0D2K0 466 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 CNTN1Q12860 1018 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 TTC31Q49AM3 519 aaPredicted RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 HS1BP3Q53T59 392 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 FAM46CQ5VWP2 391 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 GDPD4Q6W3E5 623 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 USP30Q70CQ3 517 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 BBS5Q8N3I7 341 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.29□□□□□ -0.28
TMEM258-202ENST00000535042 SLC35B2Q8TB61 432 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 ARRDC2Q8TBH0 407 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 GANCQ8TET4 914 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 COG1Q8WTW3 980 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 ATG4AQ8WYN0 398 aa13.29□□□□□ -0.28
TMEM258-202ENST00000535042 FAM131CQ96AQ9 280 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms