RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 VCPIP1Q96JH7 1222 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 TMEM79Q9BSE2 394 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 TMEM121Q9BTD3 319 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 MTMR10Q9NXD2 777 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 NOD1Q9Y239 953 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 SNX10Q9Y5X0 201 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 hCG_1818297A0A087WSY0 165 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 A0A1W2PPW3 197 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 KANSL1LA0AUZ9 987 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 HHLA1C9JL84 531 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 KPNA4O00629 521 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 CYB561D2O14569 222 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 VDRP11473 427 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 AQP5P55064 265 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 TPD52P55327 224 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 DNASE1L3Q13609 305 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 BBS9Q3SYG4 887 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 RSPO2Q6UXX9 243 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 CLEC20AQ6ZU45 233 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 TMC7Q7Z402 723 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 KATNAL2Q8IYT4 538 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 ALDH16A1Q8IZ83 802 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 METTL25Q8N6Q8 603 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 HSPH1Q92598 858 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 PCED1BQ96HM7 432 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 TOR3AQ9H497 397 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 PCYOX1Q9UHG3 505 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 PRR5-ARHGAP8B1AHC4 643 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 DAB1O75553 588 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SORBS2O94875 1100 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 PSMA2P25787 234 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 CRABP2P29373 138 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 LRPAP1P30533 357 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 GPR15P49685 360 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 EMP3P54852 163 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 YWHAEP62258 255 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 ARHGAP8P85298 464 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SLC10A2Q12908 348 aaPredicted RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 PDK4Q16654 411 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 CLPPQ16740 277 aaPredicted RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 TAF2Q6P1X5 1199 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SNX29P2Q8IUI4 249 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 B3GALNT2Q8NCR0 500 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 GRK7Q8WTQ7 553 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SENP8Q96LD8 212 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 PKMYT1Q99640 499 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 UBQLN1Q9UMX0 589 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 NUP205Q92621 2012 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 MIF4GDA9UHW6 222 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 FAM72CH0Y354 149 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 ITM2AO43736 263 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 TPPPO94811 219 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 FBXO21O94952 628 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 KLRC2P26717 231 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 COPZ1P61923 177 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 TRIM25Q14258 630 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 FAM72AQ5TYM5 149 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 FAM72DQ6L9T8 149 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 C4orf22Q6V702 233 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SPOCD1Q6ZMY3 1216 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 DCDC5Q6ZRR9 648 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 FAM72BQ86X60 149 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 HPS6Q86YV9 775 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 ERI1Q8IV48 349 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 CRIPAKQ8N1N5 446 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 LRRC52Q8N7C0 313 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 GALNT6Q8NCL4 622 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 RAET1EQ8TD07 263 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 LRRC19Q9H756 370 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 TAGLN3Q9UI15 199 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 ADAMTS6Q9UKP5 1117 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SMG5Q9UPR3 1016 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 MYO16Q9Y6X6 1858 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 A8MX80 341 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SOAT2O75908 522 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 GRK2P25098 689 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 ATN1P54259 1190 aaPredicted RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 PHC1P78364 1004 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 PPM1LQ5SGD2 360 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 SDHAF4Q5VUM1 108 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 UBE2UQ5VVX9 321 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 FBXL19Q6PCT2 694 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 DCUN1D2Q6PH85 259 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 RHBDF2Q6PJF5 856 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 TRIM72Q6ZMU5 477 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 TAS1R1Q7RTX1 841 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 MRPL10Q7Z7H8 261 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 NIPA2Q8N8Q9 360 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 BEST2Q8NFU1 509 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 ZSCAN18Q8TBC5 510 aaPredicted RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 FAM172AQ8WUF8 416 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 MAK16Q9BXY0 300 aaKnown RBP9.16□□□□□ -0.94
SF3B2-216ENST00000534765 CRISPLD1Q9H336 500 aa9.16□□□□□ -0.94
SF3B2-216ENST00000534765 EPS8L2Q9H6S3 715 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms