RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 ILKQ13418 452 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 FZD2Q14332 565 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 RTP5Q14D33 572 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 ATXN7L2Q5T6C5 722 aaPredicted RBP15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 ZNF677Q86XU0 584 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 PYROXD2Q8N2H3 581 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 RFFLQ8WZ73 363 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 CENPIQ92674 756 aaPredicted RBP15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 KLF6Q99612 283 aaPredicted RBP15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 NRSN2Q9GZP1 204 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 KLF15Q9UIH9 416 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 NEU3Q9UQ49 428 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 CLCA2Q9UQC9 943 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 ITM2BQ9Y287 266 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 SIK3Q9Y2K2 1263 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 PTPRQQ9UMZ3 2332 aa15.8■□□□□ 0.12
CLNS1A-210ENST00000528364 CHD5Q8TDI0 1954 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 SHROOM3Q8TF72 1996 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 LY6G6EA0A0G2JKS1 128 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 A6NNZ2 444 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 KRIT1O00522 736 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 SPINT1O43278 529 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 E2F1Q01094 437 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 NRG1Q02297 640 aaPredicted RBP15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 MYLK3Q32MK0 819 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 ARL13BQ3SXY8 428 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 CT47A1Q5JQC4 288 aaPredicted RBP15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 LRRC73Q5JTD7 316 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 WDR59Q6PJI9 974 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 DCBLD1Q8N8Z6 715 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 FAM172AQ8WUF8 416 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 APOLD1Q96LR9 279 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 C1QTNF2Q9BXJ5 285 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 NOL6Q9H6R4 1146 aaKnown RBP15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 TMEM248Q9NWD8 314 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 ADAM22Q9P0K1 906 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 PCDHB1Q9Y5F3 818 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 U3KQA8 63 aa15.79■□□□□ 0.12
CLNS1A-210ENST00000528364 K7ESM1 405 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 BRINP1O60477 761 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 UGT2B4P06133 528 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 KRT3P12035 628 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 CKMT1AP12532 417 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 STAT1P42224 750 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 PTPN9P43378 593 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 MAPKAPK2P49137 400 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 COPB1P53618 953 aaKnown RBP15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 SGCGQ13326 291 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 POLD3Q15054 466 aaPredicted RBP15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 SYCP1Q15431 976 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 ZNF805Q5CZA5 627 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 KIAA1161Q6NSJ0 714 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 STRADAQ7RTN6 431 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 PLPP6Q8IY26 295 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 ISG20Q96AZ6 181 aaKnown RBP15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 TBC1D31Q96DN5 1066 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 KLHL32Q96NJ5 620 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 MAGEH1Q9H213 219 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 GPR27Q9NS67 375 aa15.78■□□□□ 0.12
CLNS1A-210ENST00000528364 SPTY2D1-AS1A0A0U1RR47 76 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 NEMP1O14524 444 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 SCAMP1O15126 338 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 BUB1O43683 1085 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 KDELR3O43731 214 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 AP1G1O43747 822 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 OPA1O60313 960 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 POP4O95707 220 aaKnown RBP15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 ABCG1P45844 678 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 EIF2B5Q13144 721 aaKnown RBP15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 ACAP1Q15027 740 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 CLEC16AQ2KHT3 1053 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 HS1BP3Q53T59 392 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 FKBP15Q5T1M5 1219 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 SCYL2Q6P3W7 929 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 KYAT3Q6YP21 454 aaKnown RBP15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 DCP2Q8IU60 420 aaKnown RBP15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 CACTIN-AS1Q8N1I8 211 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 OR2AP1Q8NGE2 309 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 PCMTD1Q96MG8 357 aaPredicted RBP15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 TCEAL2Q9H3H9 227 aaPredicted RBP15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 NLGN3Q9NZ94 848 aa15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 IPO11Q9UI26 975 aaKnown RBP15.77■□□□□ 0.12
CLNS1A-210ENST00000528364 RP1P56715 2156 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 FPGTO14772 594 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 INSIG1O15503 277 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 TSPAN6O43657 245 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 MMP20O60882 483 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 RAMP2O60895 175 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 GSRP00390 522 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 CSF2P04141 144 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 GPD1P21695 349 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 ETFBP38117 255 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 NSFP46459 744 aaKnown RBP15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 HNRNPKP61978 463 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 SNRPD1P62314 119 aaKnown RBP15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 PDE1CQ14123 709 aaPredicted RBP15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 CDCP2Q5VXM1 449 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 TRIM72Q6ZMU5 477 aa15.76■□□□□ 0.11
CLNS1A-210ENST00000528364 SLFN11Q7Z7L1 901 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms