RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 C1QTNF3-AMACRE9PGA6 284 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 APOC4-APOC2K7ER74 178 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 RNF103O00237 685 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 MUSKO15146 869 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 LEFTY1O75610 366 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 TJP3O95049 919 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 APOC2P02655 101 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 OXTRP30559 389 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 GKP32189 559 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 CSNK1DP48730 415 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 RENBPP51606 427 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 METAP1P53582 386 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 RAD51Q06609 339 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 SFSWAPQ12872 951 aaKnown RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 C11orf74Q86VG3 221 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 CCDC13Q8IYE1 715 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 AADATQ8N5Z0 425 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 OR6K2Q8NGY2 324 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 GRIN3AQ8TCU5 1115 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 ZNF419Q96HQ0 510 aaPredicted RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 LRIG1Q96JA1 1093 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 ZC3H10Q96K80 434 aaKnown RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 EXOC2Q96KP1 924 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 EPC1Q9H2F5 836 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 SEMA4AQ9H3S1 761 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 ZDHHC6Q9H6R6 413 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 FBXL12Q9NXK8 326 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 WSB2Q9NYS7 404 aaPredicted RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
SMPD1-202ENST00000526280 NCKAP1Q9Y2A7 1128 aa13.12□□□□□ -0.31
SMPD1-202ENST00000526280 SPAG17Q6Q759 2223 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 SDK1Q7Z5N4 2213 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 A0A1W2PP55 124 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 KRIT1O00522 736 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 INSIG1O15503 277 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 KIF5CO60282 957 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 CCNB1P14635 433 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 BCKDHBP21953 392 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 CD6P30203 668 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 DRD3P35462 400 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 MMP13P45452 471 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 RGRP47804 291 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 AP1B1Q10567 949 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 SIM2Q14190 667 aaPredicted RBP13.11□□□□□ -0.31
SMPD1-202ENST00000526280 ZNF235Q14590 738 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 NUMA1Q14980 2115 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 ZNF569Q5MCW4 686 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 CCDC181Q5TID7 509 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 SLC36A4Q6YBV0 504 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 CEP68Q76N32 757 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 SRLQ86TD4 932 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 KBTBD6Q86V97 674 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 BBS5Q8N3I7 341 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 PGBD5Q8N414 524 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 HDDC3Q8N4P3 179 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 GANCQ8TET4 914 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 FAM131CQ96AQ9 280 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 HAUS1Q96CS2 278 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 TOE1Q96GM8 510 aaKnown RBP13.11□□□□□ -0.31
SMPD1-202ENST00000526280 OMDQ99983 421 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 MGME1Q9BQP7 344 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 CPEB1Q9BZB8 566 aaKnown RBP13.11□□□□□ -0.31
SMPD1-202ENST00000526280 DUSP15Q9H1R2 295 aaPredicted RBP13.11□□□□□ -0.31
SMPD1-202ENST00000526280 CARD9Q9H257 536 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 NEUROG2Q9H2A3 272 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 SERGEFQ9UGK8 458 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 FZD4Q9ULV1 537 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 JRKLQ9Y4A0 524 aa13.11□□□□□ -0.31
SMPD1-202ENST00000526280 PROB1E7EW31 1015 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 KCNK1O00180 336 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 KPNA3O00505 521 aaPredicted RBP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 KCNK3O14649 394 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 MAP3K13O43283 966 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 CR2P20023 1033 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 ACSL1P33121 698 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 SCNN1BP51168 640 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 IFI35P80217 286 aaPredicted RBP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 XRCC4Q13426 336 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 GRM3Q14832 879 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 PRKD1Q15139 912 aaPredicted RBP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 NOMO1Q15155 1222 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 POM121L1PQ3SYA9 428 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 PLK5Q496M5 336 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 SEL1L2Q5TEA6 688 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 B4GALNT4Q76KP1 1039 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 FAM124AQ86V42 546 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 SLC35F6Q8N357 371 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 ACTL9Q8TC94 416 aa13.1□□□□□ -0.31
SMPD1-202ENST00000526280 TFB1MQ8WVM0 346 aaKnown RBP13.1□□□□□ -0.31
SMPD1-202ENST00000526280 ARRDC3Q96B67 414 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms