RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 COPS2P61201 443 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 AP1S1P61966 158 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 DYNLT1P63172 113 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARHGAP8P85298 464 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 BCL2L1Q07817 233 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ITKQ08881 620 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 GALNT2Q10471 571 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CNTN1Q12860 1018 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PAFAH1B3Q15102 231 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PDK1Q15118 436 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 DUOXA1Q1HG43 343 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 MYLK3Q32MK0 819 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ATP13A4Q4VNC1 1196 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 SETMARQ53H47 684 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF805Q5CZA5 627 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TFDP3Q5H9I0 405 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARTNQ5T4W7 220 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ATXN7L2Q5T6C5 722 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 MARC1Q5VT66 337 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 DCAF12L1Q5VU92 463 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 KAZNQ674X7 775 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 KIAA0895LQ68EN5 471 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 NCBP2-AS2Q69YL0 99 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3GQ6DHY5 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3CQ6IPX1 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ERAP2Q6P179 960 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 NCEH1Q6PIU2 408 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 GDPD4Q6W3E5 623 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 SPOCD1Q6ZMY3 1216 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ERN2Q76MJ5 926 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ADAT2Q7Z6V5 191 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PRPF39Q86UA1 669 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CPNE8Q86YQ8 564 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TMEM139Q8IV31 216 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRRC8AQ8IWT6 810 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARHGAP12Q8IWW6 846 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 KIAA2013Q8IYS2 634 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 KATNAL2Q8IYT4 538 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 RCOR2Q8IZ40 523 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3Q8IZP1 549 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 RNF10Q8N5U6 811 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 AADATQ8N5Z0 425 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 FRMD1Q8N878 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CHST14Q8NCH0 376 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 OR6K2Q8NGY2 324 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 EXD1Q8NHP7 514 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PCDH19Q8TAB3 1148 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 UBE2Q2Q8WVN8 375 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 RAPGEF5Q92565 580 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 RAB7BQ96AH8 199 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 RNF25Q96BH1 459 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 FAF2Q96CS3 445 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF419Q96HQ0 510 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 EXOC2Q96KP1 924 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF641Q96N77 438 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 RNF157Q96PX1 679 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 C1QTNF7Q9BXJ2 289 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 HDAC8Q9BY41 377 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 KLC2Q9H0B6 622 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 BRD8Q9H0E9 1235 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 NEUROG2Q9H2A3 272 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PDFQ9HBH1 243 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PREBQ9HCU5 417 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CD93Q9NPY3 652 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 SCUBE2Q9NQ36 999 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 SEMA4GQ9NTN9 838 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 EVLQ9UI08 416 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 AMFRQ9UKV5 643 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CDV3Q9UKY7 258 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 GUCA1BQ9UMX6 200 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TTLL3Q9Y4R7 772 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 HEY1Q9Y5J3 304 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ATXN2Q99700 1313 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 A0A1B0GTW7 788 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 GRID2IPA4D2P6 1211 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 RCCD1A6NED2 376 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 GOLGA6L9A6NEM1 432 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 C16orf96A6NNT2 1141 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 BCAT2O15382 392 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZSCAN12O43309 604 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 MTSS1O43312 755 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TSPAN6O43657 245 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 PLRG1O43660 514 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 MAFKO60675 156 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CST8O60676 142 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 MAGEC1O60732 1142 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 STK10O94804 968 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TJP3O95049 919 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CTSLP07711 333 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SERPINF2P08697 491 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF806P0C7X5 589 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ADRB3P13945 408 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TGM2P21980 687 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CES1P23141 567 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCNCP24863 283 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 MSNP26038 577 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CD27P26842 260 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 HOXD11P31277 338 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 AKT2P31751 481 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms