RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ETV3LQ6ZN32 361 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 MIER3Q7Z3K6 550 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 ZC3H18Q86VM9 953 aaKnown RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 UNC5CLQ8IV45 518 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 FBXL6Q8N531 539 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 RASSF8Q8NHQ8 419 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 URGCPQ8TCY9 931 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 TEKT4Q8WW24 435 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 PSPC1Q8WXF1 523 aaKnown RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 GTF3C6Q969F1 213 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 TEKT1Q969V4 418 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 MISP3Q96FF7 219 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 GDAP1L1Q96MZ0 367 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 POLR3CQ9BUI4 534 aaPredicted RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 GPR88Q9GZN0 384 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 ADAMTS10Q9H324 1103 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 RWDD1Q9H446 243 aaPredicted RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 TM9SF3Q9HD45 589 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 GCM1Q9NP62 436 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 C20orf141Q9NUB4 165 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 SETD4Q9NVD3 440 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 DDX18Q9NVP1 670 aaKnown RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 SOHLH2Q9NX45 425 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 GDE1Q9NZC3 331 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 AIPL1Q9NZN9 384 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 NCKIPSDQ9NZQ3 722 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 CRNNQ9UBG3 495 aaPredicted RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 HDAC6Q9UBN7 1215 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 RIMKLBQ9ULI2 386 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 HCFC2Q9Y5Z7 792 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 TEX264Q9Y6I9 313 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 SQORQ9Y6N5 450 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 A0A0G2JPF8 293 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 FITM1A5D6W6 292 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 C2orf78A6NCI8 922 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 OOEPA6NGQ2 149 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ANXA2P2A6NMY6 339 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 HNRNPCL3B7ZW38 293 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 H0YCG3 227 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 IFNL4K9M1U5 179 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 IFIT3O14879 490 aaKnown RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 NKX2-8O15522 239 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 HS6ST1O60243 411 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 MITFO75030 526 aaPredicted RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 PTBP3O95758 552 aaKnown RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 AMHP03971 560 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 GBAP04062 536 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 TSPY4P0CV99 314 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 TSPY10P0CW01 314 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 HNRNPCL4P0DMR1 293 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PRG2P13727 222 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 TCEA1P23193 301 aaKnown RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 CCNCP24863 283 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 GDI1P31150 447 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 HOXA13P31271 388 aaPredicted RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 ASMTP46597 345 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 KCNJ1P48048 391 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 GBX2P52951 348 aaPredicted RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 LOXL3P58215 753 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ERVFC1P60507 584 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PRKCEQ02156 737 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 TAP1Q03518 808 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ELP6Q0PNE2 266 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 CETN1Q12798 172 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 CUL2Q13617 745 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PGM5Q15124 567 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ZSCAN23Q3MJ62 389 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 KRT79Q5XKE5 535 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 FAM90A2PQ658T7 463 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 DPY19L2P1Q6NXN4 242 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PAQR3Q6TCH7 311 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 MFSD7Q6UXD7 560 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 CLEC10AQ8IUN9 316 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.13□□□□□ -1.75
SKP1-209ENST00000522552 C11orf44Q8N8P7 122 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 Q8NA96 180 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PLA2G15Q8NCC3 412 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PSMA8Q8TAA3 256 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 GRAPLQ8TC17 118 aaPredicted RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 PTPMT1Q8WUK0 201 aaPredicted RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 GFM2Q969S9 779 aaKnown RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 DTNBP1Q96EV8 351 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 TSPAN17Q96FV3 270 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 FAR2Q96K12 515 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 HAPLN3Q96S86 360 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PARK7Q99497 189 aaKnown RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 FAM83CQ9BQN1 747 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ERP44Q9BS26 406 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 PLK3Q9H4B4 646 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 RPAP3Q9H6T3 665 aaPredicted RBP4.13□□□□□ -1.75
SKP1-209ENST00000522552 TMEM206Q9H813 350 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 USP29Q9HBJ7 922 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 TNFRSF12AQ9NP84 129 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ATAD3AQ9NVI7 634 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 NMRK1Q9NWW6 199 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 HMG20BQ9P0W2 317 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 SPASTQ9UBP0 616 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 CLIP2Q9UDT6 1046 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 TMED5Q9Y3A6 229 aa4.13□□□□□ -1.75
SKP1-209ENST00000522552 ASB3Q9Y575 518 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms