RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NAP1L5Q96NT1 182 aaPredicted RBP21.05■□□□□ 0.96
SDCBP-209ENST00000522243 CALN1Q9BXU9 219 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 GPATCH2LQ9NWQ4 482 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 MYO6Q9UM54 1294 aa21.05■□□□□ 0.96
SDCBP-209ENST00000522243 PAK4O96013 591 aaPredicted RBP21.04■□□□□ 0.96
SDCBP-209ENST00000522243 UGT2B4P06133 528 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 ABL2P42684 1182 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 SNRPD1P62314 119 aaKnown RBP21.04■□□□□ 0.96
SDCBP-209ENST00000522243 TMEM259Q4ZIN3 620 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 SFMBT2Q5VUG0 894 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 GCNT7Q6ZNI0 430 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 TMC6Q7Z403 805 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 PLPP6Q8IY26 295 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 GALNT15Q8N3T1 639 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 HMCESQ96FZ2 354 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 FEM1CQ96JP0 617 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 EPAS1Q99814 870 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 SLC17A9Q9BYT1 436 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 HAUS4Q9H6D7 363 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 GGT7Q9UJ14 662 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 AKAP13Q12802 2813 aa21.04■□□□□ 0.96
SDCBP-209ENST00000522243 CXorf51AA0A1B0GTR3 108 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 C16orf96A6NNT2 1141 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 RASA4BC9J798 803 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 RASA4O43374 803 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 TMCC1O94876 653 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 GSRP00390 522 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 PSMA2P25787 234 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 MAMLD1Q13495 774 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 MYLK3Q32MK0 819 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 ZNF805Q5CZA5 627 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 E4F1Q66K89 784 aaPredicted RBP21.03■□□□□ 0.96
SDCBP-209ENST00000522243 PROSER1Q86XN7 944 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 VOPP1Q96AW1 172 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 KLHL32Q96NJ5 620 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 CCDC86Q9H6F5 360 aaKnown RBP21.03■□□□□ 0.96
SDCBP-209ENST00000522243 CATSPERBQ9H7T0 1116 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 ITM2BQ9Y287 266 aa21.03■□□□□ 0.96
SDCBP-209ENST00000522243 RAD51BO15315 384 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 RFPL3O75679 317 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 POP4O95707 220 aaKnown RBP21.02■□□□□ 0.96
SDCBP-209ENST00000522243 DESP17661 470 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 ACADVLP49748 655 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 RPS21P63220 83 aaKnown RBP21.02■□□□□ 0.96
SDCBP-209ENST00000522243 SMAD1Q15797 465 aaKnown RBP21.02■□□□□ 0.96
SDCBP-209ENST00000522243 LRRC73Q5JTD7 316 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 KIAA1161Q6NSJ0 714 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 Q6ZSR6 202 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 ZNF571Q7Z3V5 609 aaPredicted RBP21.02■□□□□ 0.96
SDCBP-209ENST00000522243 PTAR1Q7Z6K3 402 aaPredicted RBP21.02■□□□□ 0.96
SDCBP-209ENST00000522243 SLC22A18ASQ8N1D0 253 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 VCPIP1Q96JH7 1222 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 BMFQ96LC9 184 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 PARVAQ9NVD7 372 aa21.02■□□□□ 0.96
SDCBP-209ENST00000522243 CEP295Q9C0D2 2601 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 A0A1B0GTH6 734 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 ZSCAN5CA6NGD5 496 aaPredicted RBP21.01■□□□□ 0.95
SDCBP-209ENST00000522243 IGLON5A6NGN9 336 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 WASH4PA8MWX3 477 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 NEMP1O14524 444 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 AP1G1O43747 822 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 SKILP12757 684 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 AIF1P55008 147 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 YBEYP58557 167 aaPredicted RBP21.01■□□□□ 0.95
SDCBP-209ENST00000522243 TPI1P60174 286 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 IQCB1Q15051 598 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 CA9Q16790 459 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 ZNF542PQ5EBM4 170 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 PLEKHA7Q6IQ23 1121 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 ABI3BPQ7Z7G0 1075 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 SLC25A45Q8N413 288 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 LRIG1Q96JA1 1093 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 GDAP1L1Q96MZ0 367 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 FUCA2Q9BTY2 467 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 KLHL11Q9NVR0 708 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 UCKL1Q9NWZ5 548 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 PCSK1NQ9UHG2 260 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 AP4E1Q9UPM8 1137 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 PCDHGA1Q9Y5H4 931 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 HS3ST3A1Q9Y663 406 aa21.01■□□□□ 0.95
SDCBP-209ENST00000522243 A0A1W2PQC6 194 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 POM121BA6NF01 834 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 TRABD2BA6NFA1 517 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 A6NNZ2 444 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 TRIM38O00635 465 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 IGSF6O95976 241 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 SERPINC1P01008 464 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 FTLP02792 175 aaPredicted RBP21■□□□□ 0.95
SDCBP-209ENST00000522243 DGKAP23743 735 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 RHOAP61586 193 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 SERINC3Q13530 473 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 PPP1R2P3Q6NXS1 205 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 GDPD4Q6W3E5 623 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 KDM7AQ6ZMT4 941 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 ARFGAP1Q8N6T3 406 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 TSC1Q92574 1164 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 CELF6Q96J87 481 aaKnown RBP21■□□□□ 0.95
SDCBP-209ENST00000522243 EXOC2Q96KP1 924 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 PEBP4Q96S96 227 aa21■□□□□ 0.95
SDCBP-209ENST00000522243 TRIM7Q9C029 511 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms