RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 IFT20Q8IY31 132 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 GSPT2Q8IYD1 628 aaKnown RBP13.58□□□□□ -0.24
CLK4-210ENST00000522136 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
CLK4-210ENST00000522136 FRS2Q8WU20 508 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 ERLEC1Q96DZ1 483 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 IMP4Q96G21 291 aaKnown RBP13.58□□□□□ -0.24
CLK4-210ENST00000522136 PWWP2AQ96N64 755 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 ACOX2Q99424 681 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 POLR1EQ9GZS1 481 aaKnown RBP13.58□□□□□ -0.24
CLK4-210ENST00000522136 SLC25A51Q9H1U9 297 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 WHRNQ9P202 907 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 ANAPC5Q9UJX4 755 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 CA14Q9ULX7 337 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
CLK4-210ENST00000522136 ATP9BO43861 1147 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 PMPCBO75439 489 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 TMEM63AO94886 807 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 SRPRAP08240 638 aaKnown RBP13.57□□□□□ -0.24
CLK4-210ENST00000522136 MYBL2P10244 700 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 HLA-EP13747 358 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 ITIH2P19823 946 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 CR2P20023 1033 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 GKP32189 559 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 SEMA5AQ13591 1074 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 HLTFQ14527 1009 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLK4-210ENST00000522136 KCNJ11Q14654 390 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 PREPLQ4J6C6 727 aaPredicted RBP13.57□□□□□ -0.24
CLK4-210ENST00000522136 FNDC3BQ53EP0 1204 aaKnown RBP13.57□□□□□ -0.24
CLK4-210ENST00000522136 TMEM196Q5HYL7 178 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 HIBCHQ6NVY1 386 aaPredicted RBP13.57□□□□□ -0.24
CLK4-210ENST00000522136 Q6ZVU0 165 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 PPIL6Q8IXY8 311 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 NAT8LQ8N9F0 302 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 FBXO25Q8TCJ0 367 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 EVLQ9UI08 416 aaPredicted RBP13.57□□□□□ -0.24
CLK4-210ENST00000522136 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
CLK4-210ENST00000522136 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
CLK4-210ENST00000522136 MUC22E2RYF6 1773 aaPredicted RBP13.57□□□□□ -0.24
CLK4-210ENST00000522136 CXorf51AA0A1B0GTR3 108 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 E7EVH7 732 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 NNMTP40261 264 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 GRIA1P42261 906 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 ST8SIA6P61647 398 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 SKOR1P84550 965 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 MTM1Q13496 603 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 PCSK7Q16549 785 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 ALG1LQ6GMV1 187 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 UCMAQ8WVF2 138 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 FAM3CQ92520 227 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 ART4Q93070 314 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 APOL2Q9BQE5 337 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 SCUBE2Q9NQ36 999 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 ZDHHC18Q9NUE0 388 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 CACNA2D2Q9NY47 1150 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 USP12O75317 370 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 GLULP15104 373 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 ECHS1P30084 290 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 TIE1P35590 1138 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 HSPA9P38646 679 aaKnown RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 IL12RB1P42701 662 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 WASP42768 502 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 TNFRSF4P43489 277 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 KIR2DL1P43626 348 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 LMAN1P49257 510 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 NSUN2Q08J23 767 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLK4-210ENST00000522136 PRPSAP1Q14558 356 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 KCTD11Q693B1 232 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 CCNI2Q6ZMN8 369 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 NUDT18Q6ZVK8 323 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 SRLQ86TD4 932 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 RYBPQ8N488 228 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 CHST14Q8NCH0 376 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 IPMKQ8NFU5 416 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 OR2AP1Q8NGE2 309 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 PRCCQ92733 491 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 ISG20Q96AZ6 181 aaKnown RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 NUDCD1Q96RS6 583 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 CEP44Q9C0F1 390 aa13.56□□□□□ -0.24
CLK4-210ENST00000522136 PIH1D1Q9NWS0 290 aaKnown RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 THAP10Q9P2Z0 257 aaPredicted RBP13.56□□□□□ -0.24
CLK4-210ENST00000522136 UQCRHLA0A096LP55 91 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 ANXA9O76027 345 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 AGTP01019 485 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 UQCRHP07919 91 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 PRKCHP24723 683 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 MAGEA6P43360 314 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLK4-210ENST00000522136 C2orf27AQ580R0 203 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 CARD16Q5EG05 197 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 NCEH1Q6PIU2 408 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 KDELC1Q6UW63 502 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 DPY19L3Q6ZPD9 716 aa13.55□□□□□ -0.24
CLK4-210ENST00000522136 METTL3Q86U44 580 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms