RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PACSIN1Q9BY11 444 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 TM6SF2Q9BZW4 377 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 ZDHHC6Q9H6R6 413 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLCN3-210ENST00000515420 UBA2Q9UBT2 640 aaPredicted RBP12.99□□□□□ -0.33
CLCN3-210ENST00000515420 ACTL7AQ9Y615 435 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 KNL1Q8NG31 2342 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 TRPM6Q9BX84 2022 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PLK4O00444 970 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 VILLO15195 856 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 DFNA5O60443 496 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 RNGTTO60942 597 aaKnown RBP12.98□□□□□ -0.33
CLCN3-210ENST00000515420 ADRB3P13945 408 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 SERPINB6P35237 376 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 ARHGAP25P42331 645 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 CSNK1EP49674 416 aaKnown RBP12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
CLCN3-210ENST00000515420 RHOAP61586 193 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PPP2CBP62714 309 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PPP2CAP67775 309 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 OVGP1Q12889 678 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 RFTN1Q14699 578 aaPredicted RBP12.98□□□□□ -0.33
CLCN3-210ENST00000515420 TCEAL1Q15170 157 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 MYLK3Q32MK0 819 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 POM121L1PQ3SYA9 428 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 SETMARQ53H47 684 aaPredicted RBP12.98□□□□□ -0.33
CLCN3-210ENST00000515420 SLC45A4Q5BKX6 768 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF805Q5CZA5 627 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 TMCO4Q5TGY1 634 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 NAPEPLDQ6IQ20 393 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 TMCO3Q6UWJ1 677 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PRPF39Q86UA1 669 aaKnown RBP12.98□□□□□ -0.33
CLCN3-210ENST00000515420 LRRC49Q8IUZ0 686 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 NPWQ8N729 165 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 RFFLQ8WZ73 363 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 TSC1Q92574 1164 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 HSPH1Q92598 858 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 BTBD6Q96KE9 485 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF599Q96NL3 588 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 CSPG4P5Q96PW8 444 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 CPEB1Q9BZB8 566 aaKnown RBP12.98□□□□□ -0.33
CLCN3-210ENST00000515420 SLC39A8Q9C0K1 460 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 RBSNQ9H1K0 784 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PCDH18Q9HCL0 1135 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 PCNX2A6NKB5 2137 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 DOCK9Q9BZ29 2069 aa12.98□□□□□ -0.33
CLCN3-210ENST00000515420 TMEM131Q92545 1883 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 A0A1B0GVT2 93 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 KRIT1O00522 736 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 KCNK5O95279 499 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 KRT7P08729 469 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 CEACAM1P13688 526 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 CD38P28907 300 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 CSNK1DP48730 415 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF75DP51815 510 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 BNC1Q01954 994 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 IL10RBQ08334 325 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 HNRNPDQ14103 355 aaKnown RBP12.97□□□□□ -0.33
CLCN3-210ENST00000515420 PDK2Q15119 407 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 TXNRD3NBQ6F5E7 133 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 KIAA1161Q6NSJ0 714 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 FBXL19Q6PCT2 694 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 ADAT2Q7Z6V5 191 aaKnown RBP12.97□□□□□ -0.33
CLCN3-210ENST00000515420 PIP4P1Q86T03 277 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 IQCHQ86VS3 1027 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 HORMAD1Q86X24 394 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 MAP7D3Q8IWC1 876 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 HCAR2Q8TDS4 363 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 CELF6Q96J87 481 aaKnown RBP12.97□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF670Q9BS34 389 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 ANP32EQ9BTT0 268 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 SLC32A1Q9H598 525 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 GAREM1Q9H706 876 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 EBF2Q9HAK2 575 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 FSCN3Q9NQT6 498 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 SPTLC3Q9NUV7 552 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 DKK3Q9UBP4 350 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 LHX3Q9UBR4 397 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 ANKRD6Q9Y2G4 727 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 PCDHGB2Q9Y5G2 931 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 SLCO1B1Q9Y6L6 691 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 CABIN1Q9Y6J0 2220 aa12.97□□□□□ -0.33
CLCN3-210ENST00000515420 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 A0A1W2PR77 199 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 C16orf96A6NNT2 1141 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF487B1APH4 448 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 J3KR12 359 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 RNF103O00237 685 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 MAGEC1O60732 1142 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 LCA5LO95447 670 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 CTSKP43235 329 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 RENBPP51606 427 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 SUOXP51687 545 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 ARSEP51690 589 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 CDH6P55285 790 aa12.96□□□□□ -0.33
CLCN3-210ENST00000515420 C21orf59P57076 290 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms