RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RNASEH1O60930 286 aaKnown RBP13.28□□□□□ -0.28
TCOF1-213ENST00000514442 TSPAN9O75954 239 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 AMHP03971 560 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 PGAM1P18669 254 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 RENBPP51606 427 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 SFT2D3Q587I9 215 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ZNF470Q6ECI4 717 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 C11orf96Q7Z7L8 435 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 GATA6Q92908 595 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 SLC7A6OSQ96CW6 309 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-213ENST00000514442 B3GNT5Q9BYG0 378 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ADAM7Q9H2U9 754 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 SYNDIG1Q9H7V2 258 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ABCC13Q9NSE7 274 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 FAM105AQ9NUU6 356 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 RIC8BQ9NVN3 520 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 CLCA2Q9UQC9 943 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-213ENST00000514442 CABYRO75952 493 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ITGALP20701 1170 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 TTLL9Q3SXZ7 439 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 NOMO2Q5JPE7 1267 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 AARS2Q5JTZ9 985 aaKnown RBP13.28□□□□□ -0.28
TCOF1-213ENST00000514442 RAP1GAP2Q684P5 730 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 PDPRQ8NCN5 879 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 TBL1YQ9BQ87 522 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ADGRE3Q9BY15 652 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ERBB2P04626 1255 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 GOT1P17174 413 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 FAM47BQ8NA70 645 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 MBOAT7Q96N66 472 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 C17orf80Q9BSJ5 609 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 SLC4A5Q9BY07 1137 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 ARHGAP28Q9P2N2 729 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 TRIM38O00635 465 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 RAD51BO15315 384 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 LRRC74AQ0VAA2 488 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 SCARA3Q6AZY7 606 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 GALNT18Q6P9A2 607 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 TPGS1Q6ZTW0 290 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 CACUL1Q86Y37 369 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 FLCNQ8NFG4 579 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 CDH9Q9ULB4 789 aa13.27□□□□□ -0.28
TCOF1-213ENST00000514442 MAFBQ9Y5Q3 323 aaPredicted RBP13.27□□□□□ -0.28
TCOF1-213ENST00000514442 RGSL1A5PLK6 1076 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 IKBKEQ14164 716 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 FUT11Q495W5 492 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 BROXQ5VW32 411 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 NIPAL1Q6NVV3 410 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 ADGRD1Q6QNK2 874 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 FAR2Q96K12 515 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 CHID1Q9BWS9 393 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 VTI1BQ9UEU0 232 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-213ENST00000514442 PSMD12O00232 456 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-213ENST00000514442 HOXC6P09630 235 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 ERVK-10P10266 1014 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 CD151P48509 253 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 CDK9P50750 372 aaKnown RBP13.27□□□□□ -0.29
TCOF1-213ENST00000514442 C9orf57Q5W0N0 161 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 OR52K1Q8NGK4 314 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 RP9Q8TA86 221 aaKnown RBP13.27□□□□□ -0.29
TCOF1-213ENST00000514442 ZFP42Q96MM3 310 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 C12orf65Q9H3J6 166 aaKnown RBP13.27□□□□□ -0.29
TCOF1-213ENST00000514442 GNPTGQ9UJJ9 305 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 MYH8P13535 1937 aa13.27□□□□□ -0.29
TCOF1-213ENST00000514442 RPL22P35268 128 aaKnown RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 ARL2P36404 184 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 GP5P40197 560 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 DDR2Q16832 855 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 HSFY1Q96LI6 401 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 CDK5RAP1Q96SZ6 601 aaKnown RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 MOV10Q9HCE1 1003 aaKnown RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 PRELID1Q9Y255 219 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 SMPD1P17405 629 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 PTPN20Q4JDL3 420 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 PKN3Q6P5Z2 889 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 MYO1HQ8N1T3 1032 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 LRRC39Q96DD0 335 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 RNF157Q96PX1 679 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 FAIMQ9NVQ4 179 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 CROTQ9UKG9 612 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 TRHDEQ9UKU6 1024 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 BUD23O43709 281 aaKnown RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 DARSP14868 501 aaKnown RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 NOGQ13253 232 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 MOGSQ13724 837 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 RALGPS1Q5JS13 557 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 SPRYD7Q5W111 196 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 CEP44Q9C0F1 390 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 POMPQ9Y244 141 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 hCG_1818297A0A087WSY0 165 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 HACD1B0YJ81 288 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 KRT6AP02538 564 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 C4BPAP04003 597 aaKnown RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 KRT6BP04259 564 aa13.26□□□□□ -0.29
TCOF1-213ENST00000514442 CDH2P19022 906 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-213ENST00000514442 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms