RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.44□□□□□ -1.54
PDE4D-221ENST00000514231 DENND1BQ6P3S1 775 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 NEXN-AS1Q8NBZ9 246 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 MCPH1Q8NEM0 835 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 ATOH1Q92858 354 aaPredicted RBP5.44□□□□□ -1.54
PDE4D-221ENST00000514231 RBM17Q96I25 401 aaKnown RBP5.44□□□□□ -1.54
PDE4D-221ENST00000514231 MSTO1Q9BUK6 570 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 NPFFR1Q9GZQ6 430 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 CTDSP1Q9GZU7 261 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 MVB12BQ9H7P6 319 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 TLR8Q9NR97 1041 aaKnown RBP5.44□□□□□ -1.54
PDE4D-221ENST00000514231 HDAC6Q9UBN7 1215 aa5.44□□□□□ -1.54
PDE4D-221ENST00000514231 IGLV5-52A0A0A0MRZ9 124 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 A0A1B0GVM2 712 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 DENND3A2RUS2 1198 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 DHX16O60231 1041 aaKnown RBP5.43□□□□□ -1.54
PDE4D-221ENST00000514231 HBP1O60381 514 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 SERPINI2O75830 405 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 SERPINC1P01008 464 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 CKMT1AP12532 417 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 ITGB8P26012 769 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 DCTDP32321 178 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 HNF1BP35680 557 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 PTPN9P43378 593 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 COMPP49747 757 aaPredicted RBP5.43□□□□□ -1.54
PDE4D-221ENST00000514231 TUBA1BP68363 451 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 HYAL1Q12794 435 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 DCAF6Q58WW2 860 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 C9orf50Q5SZB4 431 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 C9orf57Q5W0N0 161 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 H1FNTQ75WM6 255 aaPredicted RBP5.43□□□□□ -1.54
PDE4D-221ENST00000514231 MOGAT3Q86VF5 341 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 TMEM57Q8N5G2 664 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 MYCT1Q8N699 235 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 ANKRD44Q8N8A2 993 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 SPPL3Q8TCT6 385 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 TBC1D22AQ8WUA7 517 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 AFG1LQ8WV93 481 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 TMED6Q8WW62 240 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 DUX5Q96PT3 197 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 FAM167BQ9BTA0 163 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 IL25Q9H293 177 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 WDR6Q9NNW5 1121 aaKnown RBP5.43□□□□□ -1.54
PDE4D-221ENST00000514231 RIPOR2Q9Y4F9 1068 aa5.43□□□□□ -1.54
PDE4D-221ENST00000514231 SMTNL1A8MU46 457 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 KDM4EB2RXH2 506 aaPredicted RBP5.42□□□□□ -1.54
PDE4D-221ENST00000514231 STX16-NPEPL1H3BU86 382 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 STX16O14662 325 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 KRT86O43790 486 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 CENPAP49450 140 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 BNC1Q01954 994 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 ST3GAL1Q11201 340 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 OS9Q13438 667 aaPredicted RBP5.42□□□□□ -1.54
PDE4D-221ENST00000514231 CTTNQ14247 550 aaKnown RBP5.42□□□□□ -1.54
PDE4D-221ENST00000514231 KRT81Q14533 505 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 DNASE2BQ8WZ79 361 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 SH3KBP1Q96B97 665 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 RNFT2Q96EX2 444 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 FIZ1Q96SL8 496 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 C1QTNF4Q9BXJ3 329 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 TTC12Q9H892 705 aaPredicted RBP5.42□□□□□ -1.54
PDE4D-221ENST00000514231 DDX31Q9H8H2 851 aaKnown RBP5.42□□□□□ -1.54
PDE4D-221ENST00000514231 ZNF556Q9HAH1 456 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 CNPY2Q9Y2B0 182 aa5.42□□□□□ -1.54
PDE4D-221ENST00000514231 SRRM3A6NNA2 597 aaPredicted RBP5.41□□□□□ -1.54
PDE4D-221ENST00000514231 MYF6P23409 242 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 MXI1P50539 228 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 POU3F1Q03052 451 aaPredicted RBP5.41□□□□□ -1.54
PDE4D-221ENST00000514231 SLC18A2Q05940 514 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 FAM27E3Q08E93 113 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 COASYQ13057 564 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 LPIN1Q14693 890 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 ME3Q16798 604 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 PLEKHO1Q53GL0 409 aaPredicted RBP5.41□□□□□ -1.54
PDE4D-221ENST00000514231 CUZD1Q86UP6 607 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 RASSF8Q8NHQ8 419 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 GPT2Q8TD30 523 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 CLK4Q9HAZ1 481 aaKnown RBP5.41□□□□□ -1.54
PDE4D-221ENST00000514231 PLSCR4Q9NRQ2 329 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 OCIAD1Q9NX40 245 aa5.41□□□□□ -1.54
PDE4D-221ENST00000514231 NOTCH4Q99466 2003 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 A0A0U1RQJ8 604 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 B9A039 149 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 SLC16A5O15375 505 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 DAOP14920 347 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 C21orf33P30042 268 aaPredicted RBP5.4□□□□□ -1.54
PDE4D-221ENST00000514231 GRK6P43250 576 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 CLCN5P51795 746 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 RHBDL3P58872 404 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
PDE4D-221ENST00000514231 ERVFC1-1P60608 527 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 EEF1A2Q05639 463 aaKnown RBP5.4□□□□□ -1.54
PDE4D-221ENST00000514231 ADCK5Q3MIX3 580 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 FBXO43Q4G163 708 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 NAPEPLDQ6IQ20 393 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.4□□□□□ -1.54
PDE4D-221ENST00000514231 FTSJ3Q8IY81 847 aaKnown RBP5.4□□□□□ -1.54
PDE4D-221ENST00000514231 GHDCQ8N2G8 530 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 TMEM170AQ8WVE7 144 aa5.4□□□□□ -1.54
PDE4D-221ENST00000514231 NOD2Q9HC29 1040 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms