RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 ANKRD20A8PQ5CZ79 823 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 ATXN7L2Q5T6C5 722 aaPredicted RBP12.68□□□□□ -0.38
PTCD2-209ENST00000511752 AGBL4Q5VU57 503 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 ERN2Q76MJ5 926 aaKnown RBP12.68□□□□□ -0.38
PTCD2-209ENST00000511752 RHOT1Q8IXI2 618 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 ZCCHC9Q8N567 271 aaKnown RBP12.68□□□□□ -0.38
PTCD2-209ENST00000511752 ARRDC3Q96B67 414 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 OSBPL1AQ9BXW6 950 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 HDAC8Q9BY41 377 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 PREBQ9HCU5 417 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 ETNK2Q9NVF9 386 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 KLHL11Q9NVR0 708 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 LHX3Q9UBR4 397 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 IPO11Q9UI26 975 aaKnown RBP12.68□□□□□ -0.38
PTCD2-209ENST00000511752 MFHAS1Q9Y4C4 1052 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 PI4KAP42356 2102 aa12.68□□□□□ -0.38
PTCD2-209ENST00000511752 ADAMTS9Q9P2N4 1935 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 SPOPO43791 374 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 IGHV4-34P06331 123 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 CD48P09326 243 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 KDELR1P24390 212 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 IL4RP24394 825 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 PUM1Q14671 1186 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTCD2-209ENST00000511752 GRM3Q14832 879 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 CYTH1Q15438 398 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 TEAD4Q15561 434 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 PIP5KL1Q5T9C9 394 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 TMCO4Q5TGY1 634 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 STPG1Q5TH74 334 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 LRRC38Q5VT99 294 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 FBXL19Q6PCT2 694 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 TXLNBQ8N3L3 684 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 ATPAF2Q8N5M1 289 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 NETO2Q8NC67 525 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 OR6K2Q8NGY2 324 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 NSMCE1Q8WV22 266 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 RMDN1Q96DB5 314 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 CALR3Q96L12 384 aaKnown RBP12.67□□□□□ -0.38
PTCD2-209ENST00000511752 ZNF599Q96NL3 588 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 RTKNQ9BST9 563 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 CINPQ9BW66 212 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-209ENST00000511752 CAPN10Q9HC96 672 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 TMEM9BQ9NQ34 198 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 RXFP3Q9NSD7 469 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 DDX56Q9NY93 547 aaKnown RBP12.67□□□□□ -0.38
PTCD2-209ENST00000511752 MYO15AQ9UKN7 3530 aa12.67□□□□□ -0.38
PTCD2-209ENST00000511752 USP34Q70CQ2 3546 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 GVINP1Q7Z2Y8 2422 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 A0A1W2PPC4 97 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 ZNF487B1APH4 448 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 ARHGAP33O14559 1287 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 SLC30A4O14863 429 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 UGT2B4P06133 528 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 ADRB3P13945 408 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 ENGP17813 658 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 COMTP21964 271 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 GKP32189 559 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 NUDT1P36639 197 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 RENBPP51606 427 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 AFF3P51826 1226 aaKnown RBP12.66□□□□□ -0.38
PTCD2-209ENST00000511752 GSDMDP57764 484 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 LBRQ14739 615 aaKnown RBP12.66□□□□□ -0.38
PTCD2-209ENST00000511752 PAFAH1B3Q15102 231 aaKnown RBP12.66□□□□□ -0.38
PTCD2-209ENST00000511752 ZNF805Q5CZA5 627 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 NCBP2-AS2Q69YL0 99 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 NEK5Q6P3R8 708 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 GDPD4Q6W3E5 623 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 RAD9BQ6WBX8 426 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 ARHGAP36Q6ZRI8 547 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 PRPF39Q86UA1 669 aaKnown RBP12.66□□□□□ -0.38
PTCD2-209ENST00000511752 TRIM69Q86WT6 500 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 VSIG1Q86XK7 387 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 LRRC49Q8IUZ0 686 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 BBS5Q8N3I7 341 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 PCDH19Q8TAB3 1148 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 FAF2Q96CS3 445 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 GTPBP2Q9BX10 602 aaKnown RBP12.66□□□□□ -0.38
PTCD2-209ENST00000511752 ZDHHC5Q9C0B5 715 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 TM9SF3Q9HD45 589 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 DLL3Q9NYJ7 618 aa12.66□□□□□ -0.38
PTCD2-209ENST00000511752 PLXNA2O75051 1894 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 SHROOM3Q8TF72 1996 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 PCDH15Q96QU1 1955 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 C16orf96A6NNT2 1141 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 RNF103O00237 685 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 LATO43561 262 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 PSTPIP1O43586 416 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 MFSD11O43934 449 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 BUB1BO60566 1050 aaPredicted RBP12.65□□□□□ -0.38
PTCD2-209ENST00000511752 RNGTTO60942 597 aaKnown RBP12.65□□□□□ -0.38
PTCD2-209ENST00000511752 PCDH8O95206 1070 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 KRT1P04264 644 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 TNNT1P13805 278 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
PTCD2-209ENST00000511752 MAPK8P45983 427 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 GRIA4P48058 902 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 CSNK1DP48730 415 aa12.65□□□□□ -0.38
PTCD2-209ENST00000511752 CSNK1EP49674 416 aaKnown RBP12.65□□□□□ -0.38
PTCD2-209ENST00000511752 VAV2P52735 878 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms