RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 LRRC49Q8IUZ0 686 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 PGBD5Q8N414 524 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 HDDC3Q8N4P3 179 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 P3H4Q92791 437 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 TOE1Q96GM8 510 aaKnown RBP16.74■□□□□ 0.27
SCLT1-205ENST00000503401 ZNF599Q96NL3 588 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 FAM118BQ9BPY3 351 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 SEPT3Q9UH03 358 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 C1QTNF3-AMACRE9PGA6 284 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 KCNK1O00180 336 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 ENC1O14682 589 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 PRNPP04156 253 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 C5AR1P21730 350 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 CCNCP24863 283 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 PTPN7P35236 360 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 DRD3P35462 400 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 MMP13P45452 471 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 ZBTB16Q05516 673 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 PPIDQ08752 370 aaKnown RBP16.73■□□□□ 0.27
SCLT1-205ENST00000503401 PDK1Q15118 436 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 ZNF569Q5MCW4 686 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 MARC1Q5VT66 337 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 ZC3H18Q86VM9 953 aaKnown RBP16.73■□□□□ 0.27
SCLT1-205ENST00000503401 PLPP6Q8IY26 295 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 CCDC13Q8IYE1 715 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCLT1-205ENST00000503401 NSMCE1Q8WV22 266 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 ARRDC3Q96B67 414 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 TSGA13Q96PP4 275 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 OMDQ99983 421 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 TLR10Q9BXR5 811 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 CEP41Q9BYV8 373 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 NEUROG2Q9H2A3 272 aa16.73■□□□□ 0.27
SCLT1-205ENST00000503401 ZFHX2Q9C0A1 2572 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 DOCK9Q9BZ29 2069 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 KCNK3O14649 394 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 MATN3O15232 486 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 MAP3K13O43283 966 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 PIGNO95427 931 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 POP4O95707 220 aaKnown RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 UGT2B4P06133 528 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 CD6P30203 668 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 ACSL1P33121 698 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 CETN2P41208 172 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 NR2C2P49116 596 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 RPL6Q02878 288 aaKnown RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 CNTN1Q12860 1018 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 BYSLQ13895 437 aaKnown RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 PLK5Q496M5 336 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 FAM46CQ5VWP2 391 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 TIGD7Q6NT04 549 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 TMEFF1Q8IYR6 380 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 C17orf53Q8N3J3 647 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 TMIEQ8NEW7 156 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 PSKH2Q96QS6 385 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 EPC1Q9H2F5 836 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 C10orf88Q9H8K7 445 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 NT5MQ9NPB1 228 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 WSB2Q9NYS7 404 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-205ENST00000503401 TTLL3Q9Y4R7 772 aa16.72■□□□□ 0.27
SCLT1-205ENST00000503401 TCRBV7S2A1N4TA0A589 114 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 APOC4-APOC2K7ER74 178 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 PPP1R12AO14974 1030 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-205ENST00000503401 IGLV3-19P01714 112 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 APOC2P02655 101 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 CCNB1P14635 433 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 SCNN1BP51168 640 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 HNRNPDQ14103 355 aaKnown RBP16.71■□□□□ 0.27
SCLT1-205ENST00000503401 ARMCX6Q7L4S7 300 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 SLC35F6Q8N357 371 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 TEX26Q8N6G2 289 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 ACTL9Q8TC94 416 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 MAML1Q92585 1016 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 NSMCE3Q96MG7 304 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 GPR174Q9BXC1 333 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 DUSP15Q9H1R2 295 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-205ENST00000503401 RBM22Q9NW64 420 aaKnown RBP eCLIP16.71■□□□□ 0.277e-6■■■■□ 24.6
SCLT1-205ENST00000503401 SEPT10Q9P0V9 454 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 SCML1Q9UN30 329 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 NCKAP1Q9Y2A7 1128 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 EFR3BQ9Y2G0 817 aa16.71■□□□□ 0.27
SCLT1-205ENST00000503401 FAM47DPA6NHR8 397 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 NDUFS2O75306 463 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 TJP3O95049 919 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 JCHAINP01591 159 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 CXCR5P32302 372 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 RENBPP51606 427 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 OTUD4Q01804 1114 aaKnown RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 ZBTB17Q13105 803 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 USP30Q70CQ3 517 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 SRLQ86TD4 932 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 KLHL32Q96NJ5 620 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 MGME1Q9BQP7 344 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 BTBD1Q9H0C5 482 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 SMG5Q9UPR3 1016 aaKnown RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 DNAH14Q0VDD8 3507 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 KIF5CO60282 957 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms