RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 GALNT2Q10471 571 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 SF3A2Q15428 464 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 TMCO4Q5TGY1 634 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 ERN2Q76MJ5 926 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 RABEPKQ7Z6M1 372 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 DAAM2Q86T65 1068 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 RGL4Q8IZJ4 473 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 ATPAF2Q8N5M1 289 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 CEP76Q8TAP6 659 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 BIRC7Q96CA5 298 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 OSBPL1AQ9BXW6 950 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 SUSD2Q9UGT4 822 aa18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 PTPRZ1P23471 2315 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-209ENST00000503346 SDK1Q7Z5N4 2213 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 ZNF292O60281 2723 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 FAM47DPA6NHR8 397 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 KRIT1O00522 736 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 KHNYNO15037 678 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 ARHGAP6O43182 974 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 IGHV4-34P06331 123 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 TNNT1P13805 278 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 MAOBP27338 520 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 CSNK1DP48730 415 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 CCR5P51681 352 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 TAS2R38P59533 333 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 KIF5AQ12840 1032 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 LBRQ14739 615 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 TAZQ16635 292 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 DUOXA1Q1HG43 343 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 SLC9A4Q6AI14 798 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 TCEAL6Q6IPX3 200 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 SLC23A3Q6PIS1 610 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 C12orf50Q8NA57 414 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 C1orf216Q8TAB5 229 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 TCEAL3Q969E4 200 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 EXOC2Q96KP1 924 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 PSKH2Q96QS6 385 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 CINPQ9BW66 212 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 CPEB1Q9BZB8 566 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 SEPT3Q9UH03 358 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 THADAQ6YHU6 1953 aa18.49■□□□□ 0.55
PDLIM7-209ENST00000503346 WDR87Q6ZQQ6 2873 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 NYNRINQ9P2P1 1898 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 PATE3B3GLJ2 98 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 FSBPO95073 299 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 GNSP15586 552 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 CD27P26842 260 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 GARSP41250 739 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 NEK3P51956 506 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 NAP1L1P55209 391 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 GBE1Q04446 702 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 NSUN2Q08J23 767 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 SLC10A7Q0GE19 358 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 GRM3Q14832 879 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 ODF2Q5BJF6 829 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 ZNF805Q5CZA5 627 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 TRIM61Q5EBN2 209 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 MFSD7Q6UXD7 560 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 PARS2Q7L3T8 475 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 LRRC8AQ8IWT6 810 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 KATNAL2Q8IYT4 538 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 PLD5Q8N7P1 536 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 LRRC57Q8N9N7 239 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 TSEN2Q8NCE0 465 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 FATE1Q969F0 183 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 RNF25Q96BH1 459 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 ORAI3Q9BRQ5 295 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 MAK16Q9BXY0 300 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 PREBQ9HCU5 417 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 ADGRG1Q9Y653 693 aa18.48■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3DA0A087WVF3 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3IA0A087WXS9 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3EA0A087X179 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3KA0A087X1G2 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 A0A0U1RQJ8 604 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 A0A1B0GTW7 788 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 GRID2IPA4D2P6 1211 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3FA6NER0 549 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 PRR5-ARHGAP8B1AHC4 643 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3LB9A6J9 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 APOL1O14791 398 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 INSIG1O15503 277 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 UGT2B4P06133 528 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 SERPINF2P08697 491 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3HP0C7X1 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 ZFXP17010 805 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 MX2P20592 715 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 HSPA9P38646 679 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 CDKN2BP42772 138 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 RGRP47804 291 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 RENBPP51606 427 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 ARHGAP8P85298 464 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 IFI16Q16666 785 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3GQ6DHY5 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3CQ6IPX1 549 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 NEK5Q6P3R8 708 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 GDPD4Q6W3E5 623 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TBC1D3Q8IZP1 549 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms