RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 PTPRN2Q92932 1015 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 HEPHQ9BQS7 1158 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 CPEB1Q9BZB8 566 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 SLC25A51Q9H1U9 297 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 L2HGDHQ9H9P8 463 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 GLOD4Q9HC38 313 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 SCUBE2Q9NQ36 999 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 SMARCAL1Q9NZC9 954 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 LHX3Q9UBR4 397 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 SCML1Q9UN30 329 aa17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 AAR2Q9Y312 384 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-215ENST00000498160 K7ERQ8 282 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 PSMD3O43242 534 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 IFNB1P01574 187 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 HLA-DQB2P05538 268 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 SERPINF2P08697 491 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 CR2P20023 1033 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 PRKCHP24723 683 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 NFKBIAP25963 317 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 FDFT1P37268 417 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 TNNT3P45378 269 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 ZBTB16Q05516 673 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 ZBTB17Q13105 803 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 FZD5Q13467 585 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 PARP6Q2NL67 630 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 CCDC70Q6NSX1 233 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 LEKR1Q6ZMV7 388 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 Q6ZVU0 165 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 SRLQ86TD4 932 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 TSEN2Q8NCE0 465 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 TMIEQ8NEW7 156 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 OR2A12Q8NGT7 310 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 OR2T3Q8NH03 318 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 HCAR2Q8TDS4 363 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 PPP1R16AQ96I34 528 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 ZNF641Q96N77 438 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 AGAP3Q96P47 875 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 FCRL5Q96RD9 977 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 DDX47Q9H0S4 455 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 GBA3Q9H227 469 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 ATP13A3Q9H7F0 1226 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 RBM12Q9NTZ6 932 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 HECAQ9UBI9 543 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 RSPH14Q9UHP6 348 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 HCN2Q9UL51 889 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 TTLL3Q9Y4R7 772 aa17.81■□□□□ 0.44
CTDSP1-215ENST00000498160 FAM187AA6NFU0 413 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 ERI2A8K979 691 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 INSIG1O15503 277 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 SOCS5O75159 536 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 ZNF821O75541 412 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 PAPSS2O95340 614 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 SLC34A2O95436 690 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 C7P10643 843 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 SERPINA4P29622 427 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 SCNN1BP51168 640 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 CCR3P51677 355 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 CCNHP51946 323 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 GEMP55040 296 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 DR1Q01658 176 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 PPP1R7Q15435 360 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 CRY1Q16526 586 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 MYLK3Q32MK0 819 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 C9orf64Q5T6V5 341 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 CWF19L1Q69YN2 538 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 RYBPQ8N488 228 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 ACOX2Q99424 681 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 TM6SF2Q9BZW4 377 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 PRSS16Q9NQE7 514 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 IL36AQ9UHA7 158 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 MTF2Q9Y483 593 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 ARIH1Q9Y4X5 557 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 CKAP5Q14008 2032 aa17.8■□□□□ 0.44
CTDSP1-215ENST00000498160 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 ADAM23O75077 832 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 SIN3BO75182 1162 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 ADH1BP00325 375 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 HLA-EP13747 358 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 NUMBP49757 651 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 BCL2L1Q07817 233 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 MPP3Q13368 585 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 GLE1Q53GS7 698 aaKnown RBP17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 ZNF776Q68DI1 518 aaPredicted RBP17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 DPY19L3Q6ZPD9 716 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 KLHL7Q8IXQ5 586 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 CAMKK1Q8N5S9 505 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 CNTD1Q8N815 330 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 IMP4Q96G21 291 aaKnown RBP17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 SEMA3CQ99985 751 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 RSPH9Q9H1X1 276 aaPredicted RBP17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 TNKS2Q9H2K2 1166 aa17.79■□□□□ 0.44
CTDSP1-215ENST00000498160 MYO18AQ92614 2054 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 SMAPO00193 183 aa17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 KRT14P02533 472 aa17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 KCNJ1P48048 391 aa17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 SUOXP51687 545 aa17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 GDF10P55107 478 aa17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 RPL26P61254 145 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 PTK6Q13882 451 aa17.78■□□□□ 0.44
CTDSP1-215ENST00000498160 TTC27Q6P3X3 843 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms