RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SAMD14Q8IZD0 417 aaPredicted RBP3.08□□□□□ -1.92
RIF1-212ENST00000498041 PELI3Q8N2H9 469 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 HORMAD2Q8N7B1 307 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 SETD9Q8NE22 299 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 ENGASEQ8NFI3 743 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 GCC1Q96CN9 775 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 RNFT2Q96EX2 444 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 TWNKQ96RR1 684 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 TTC12Q9H892 705 aaPredicted RBP3.08□□□□□ -1.92
RIF1-212ENST00000498041 KRCC1Q9NPI7 259 aaPredicted RBP3.08□□□□□ -1.92
RIF1-212ENST00000498041 GRHL1Q9NZI5 618 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 SEL1LQ9UBV2 794 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.08□□□□□ -1.92
RIF1-212ENST00000498041 GDAQ9Y2T3 454 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 DGKBQ9Y6T7 804 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 PLCH2O75038 1416 aa3.08□□□□□ -1.92
RIF1-212ENST00000498041 TARSL2A2RTX5 802 aaKnown RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 VWA3AA6NCI4 1184 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 PEX12O00623 359 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 HSPB6O14558 160 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 TNFRSF13BO14836 293 aaPredicted RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 KLK10O43240 276 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 KCNAB3O43448 404 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 IL1AP01583 271 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 ALPLP05186 524 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 WEE2P0C1S8 567 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 ENO3P13929 434 aaPredicted RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 YWHAQP27348 245 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 RFC1P35251 1148 aaPredicted RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 AVPR1AP37288 418 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 DPP6P42658 865 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 RFX2P48378 723 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 PPM1FP49593 454 aaPredicted RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 TMPRSS3P57727 454 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 SELENOVP59797 346 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 ZP1P60852 638 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 TBL3Q12788 808 aaKnown RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 MAPK7Q13164 816 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 GPR18Q14330 331 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 DUSP6Q16828 381 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 DCAF12L2Q5VW00 463 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 TBC1D9BQ66K14 1250 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 TMEM71Q6P5X7 295 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 Q6ZTK2 550 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 TRIM74Q86UV6 250 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 TRIM73Q86UV7 250 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 TMC8Q8IU68 726 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 ZDHHC17Q8IUH5 632 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 GHDCQ8N2G8 530 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 CEP76Q8TAP6 659 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 ASB5Q8WWX0 329 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 WASF1Q92558 559 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 URB1-AS1Q96HZ7 61 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 CAMK1GQ96NX5 476 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 REEP2Q9BRK0 252 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 POLR3GLQ9BT43 218 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 SF3B5Q9BWJ5 86 aaKnown RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 POLDIP3Q9BY77 421 aaKnown RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 KLHL31Q9H511 634 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 STN1Q9H668 368 aaKnown RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 CATSPERBQ9H7T0 1116 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 MRPL44Q9H9J2 332 aaKnown RBP3.07□□□□□ -1.92
RIF1-212ENST00000498041 PLAC1Q9HBJ0 212 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 RIC8AQ9NPQ8 531 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 HIF1ANQ9NWT6 349 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 NCKIPSDQ9NZQ3 722 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 HDAC6Q9UBN7 1215 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 CLDN16Q9Y5I7 305 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 NUP155O75694 1391 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 ANKRD30BQ9BXX2 1392 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 C9orf84Q5VXU9 1444 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 MROH2AA6NES4 1674 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 E9PCH4 1651 aa3.07□□□□□ -1.92
RIF1-212ENST00000498041 UHRF1BP1LA0JNW5 1464 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 HFM1A2PYH4 1435 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 DDTLA6NHG4 134 aaPredicted RBP3.06□□□□□ -1.92
RIF1-212ENST00000498041 FAM90A8PA6NJQ4 464 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 SH2D7A6NKC9 451 aaPredicted RBP3.06□□□□□ -1.92
RIF1-212ENST00000498041 MS4A18H0YCH9 400 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 EIF3FO00303 357 aaPredicted RBP3.06□□□□□ -1.92
RIF1-212ENST00000498041 SERPINC1P01008 464 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 MMP3P08254 477 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 FAM90A13PP0C7W8 464 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 FAM90A24PP0C7X0 464 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 HOXB6P17509 224 aaKnown RBP3.06□□□□□ -1.92
RIF1-212ENST00000498041 ARRB2P32121 409 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 PTPN9P43378 593 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 PPP3CCP48454 512 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 CDH12P55289 794 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 ROR2Q01974 943 aaKnown RBP3.06□□□□□ -1.92
RIF1-212ENST00000498041 UBE3AQ05086 875 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 BIRC3Q13489 604 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 RAPGEF1Q13905 1077 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 TRIP12Q14669 1992 aaPredicted RBP3.06□□□□□ -1.92
RIF1-212ENST00000498041 TAF12Q16514 161 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 RPE65Q16518 533 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 DNTTIP2Q5QJE6 756 aaKnown RBP3.06□□□□□ -1.92
RIF1-212ENST00000498041 FRMPD1Q5SYB0 1578 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 MAP3K21Q5TCX8 1036 aa3.06□□□□□ -1.92
RIF1-212ENST00000498041 OTUD1Q5VV17 481 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms