RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 FIBINQ8TAL6 211 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 FAM71BQ8TC56 605 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 FAM3CQ92520 227 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CHFRQ96EP1 664 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 P2RY11Q96G91 374 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 P2RY13Q9BPV8 354 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TRIM56Q9BRZ2 755 aaKnown RBP10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CALN1Q9BXU9 219 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ARHGEF4Q9NR80 690 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KLHL11Q9NVR0 708 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TMEM248Q9NWD8 314 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CWC15Q9P013 229 aaKnown RBP10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KIAA1522Q9P206 1035 aaPredicted RBP10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RCOR3Q9P2K3 495 aaPredicted RBP10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 FBXO10Q9UK96 956 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 NEU3Q9UQ49 428 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 MRPS17Q9Y2R5 130 aaKnown RBP10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 PCDHA3Q9Y5H8 950 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CHD5Q8TDI0 1954 aa10.37□□□□□ -0.75
RAB11FIP3-211ENST00000495663 LRRD1A4D1F6 860 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 USP27XA6NNY8 438 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 WASH4PA8MWX3 477 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KIF5CO60282 957 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 APODP05090 189 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RHOCP08134 193 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 DRD1P21728 446 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KDELR1P24390 212 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 SLC6A11P48066 632 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 MAPKAPK2P49137 400 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 GALK1P51570 392 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ARSEP51690 589 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 STARD6P59095 220 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KDSRQ06136 332 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 GRSF1Q12849 480 aaKnown RBP eCLIP10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 SLC12A1Q13621 1099 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 DPYSL3Q14195 570 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 PON2Q15165 354 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RFX8Q6ZV50 586 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ANKS1BQ7Z6G8 1248 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TFAP2DQ7Z6R9 452 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ZAR1Q86SH2 424 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 SETD3Q86TU7 594 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 NLRP14Q86W24 1093 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 VSIG1Q86XK7 387 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KATNAL2Q8IYT4 538 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RTL3Q8N8U3 475 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TERB1Q8NA31 727 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 WFDC5Q8TCV5 224 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RAPGEF5Q92565 580 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KRT35Q92764 455 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RBM41Q96IZ5 413 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CSPG4P5Q96PW8 444 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ZNF670Q9BS34 389 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 YIPF2Q9BWQ6 316 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 NPHS2Q9NP85 383 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RAD18Q9NS91 495 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KCND1Q9NSA2 647 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ABCB8Q9NUT2 735 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CLEC4EQ9ULY5 219 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TBC1D30Q9Y2I9 924 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 SLC27A6Q9Y2P4 619 aa10.36□□□□□ -0.75
RAB11FIP3-211ENST00000495663 BDP1A6H8Y1 2624 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KANSL1LA0AUZ9 987 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TBC1D3BA6NDS4 549 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ZNF487B1APH4 448 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 PI4K2BG5E9Z4 385 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TRIM24O15164 1050 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ZRANB2O95218 330 aaKnown RBP eCLIP10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 KAT7O95251 611 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CD48P09326 243 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CISD3P0C7P0 127 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 PABPC1P11940 636 aaKnown RBP10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ERCC2P18074 760 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CD72P21854 359 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 HLA-FP30511 346 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CD70P32970 193 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CETN2P41208 172 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 GRIA2P42262 883 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 MARCKSL1P49006 195 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RWDD2BP57060 319 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 LMAN2Q12907 356 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 DPYSQ14117 519 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ANKRD20A8PQ5CZ79 823 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 FSCBQ5H9T9 825 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 TMEM196Q5HYL7 178 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ZNF569Q5MCW4 686 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 MEI1Q5TIA1 1274 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 NAIF1Q69YI7 327 aaPredicted RBP10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CXorf57Q6NSI4 855 aaKnown RBP10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 ZNF783Q6ZMS7 281 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 CCDC50Q8IVM0 306 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 RCOR2Q8IZ40 523 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 AHI1Q8N157 1196 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 EXD1Q8NHP7 514 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 WFIKKN2Q8TEU8 576 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 EZH1Q92800 747 aaPredicted RBP10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 HES6Q96HZ4 224 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 NELL2Q99435 816 aa10.35□□□□□ -0.75
RAB11FIP3-211ENST00000495663 MFSD1Q9H3U5 465 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms