RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TEX33O43247 280 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-208ENST00000494728 RFPL3O75679 317 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 PCDH8O95206 1070 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 KRT3P12035 628 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 GPD1P21695 349 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 NUDT1P36639 197 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 MAPKAPK2P49137 400 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 NEK3P51956 506 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 CYP4F3Q08477 520 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 STAT4Q14765 748 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 ZNF542PQ5EBM4 170 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 ACBD5Q5T8D3 534 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-208ENST00000494728 HES3Q5TGS1 186 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 RETSATQ6NUM9 610 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 NEK5Q6P3R8 708 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 FBXL19Q6PCT2 694 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 ABI3BPQ7Z7G0 1075 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 GALNT15Q8N3T1 639 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 KLHDC7BQ96G42 594 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 CRELD1Q96HD1 420 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 BMFQ96LC9 184 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-208ENST00000494728 KLF6Q99612 283 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-208ENST00000494728 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 HEPHQ9BQS7 1158 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 SELENOOQ9BVL4 669 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 CALN1Q9BXU9 219 aa11.85□□□□□ -0.51
VTI1A-208ENST00000494728 SEPT11Q9NVA2 429 aaKnown RBP11.85□□□□□ -0.51
VTI1A-208ENST00000494728 HECAQ9UBI9 543 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-208ENST00000494728 LY6G6EA0A0G2JKS1 128 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 LRRC10BA6NIK2 292 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 FFAR2O15552 330 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 SIGLEC6O43699 453 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 RAMP2O60895 175 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 TMCC1O94876 653 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 UGT2B4P06133 528 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 MYF5P13349 255 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 ITIH2P19823 946 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 HNRNPA2B1P22626 353 aaKnown RBP11.84□□□□□ -0.51
VTI1A-208ENST00000494728 DGKAP23743 735 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 L1CAMP32004 1257 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-208ENST00000494728 TYRO3Q06418 890 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 OVGP1Q12889 678 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 COL28A1Q2UY09 1125 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 DNAJC24Q6P3W2 148 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 PTAR1Q7Z6K3 402 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-208ENST00000494728 OXR1Q8N573 874 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 RTL3Q8N8U3 475 aaKnown RBP11.84□□□□□ -0.51
VTI1A-208ENST00000494728 HMCESQ96FZ2 354 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 PPP1R16AQ96I34 528 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 GBP4Q96PP9 640 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 TRIM7Q9C029 511 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 DYRK4Q9NR20 520 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 GPATCH2LQ9NWQ4 482 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 KLF15Q9UIH9 416 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 PNMA8BQ9ULN7 279 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-208ENST00000494728 DAAM1Q9Y4D1 1078 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-208ENST00000494728 PCDHGA1Q9Y5H4 931 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 U3KQA8 63 aa11.84□□□□□ -0.51
VTI1A-208ENST00000494728 SIGLEC16A6NMB1 481 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 C16orf96A6NNT2 1141 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 KRIT1O00522 736 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 INSIG1O15503 277 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 PAK4O96013 591 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-208ENST00000494728 GSRP00390 522 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 CALB1P05937 261 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 TPM2P07951 284 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 AKT2P31751 481 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 ZNF143P52747 638 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-208ENST00000494728 SLC20A2Q08357 652 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 FZD2Q14332 565 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 CA9Q16790 459 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 ANO6Q4KMQ2 910 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 CCDC183Q5T5S1 534 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 KYAT3Q6YP21 454 aaKnown RBP11.83□□□□□ -0.52
VTI1A-208ENST00000494728 CYP4V2Q6ZWL3 525 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-208ENST00000494728 IRF2BP2Q7Z5L9 587 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 SLFN11Q7Z7L1 901 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 MCOLN2Q8IZK6 566 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 RYBPQ8N488 228 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-208ENST00000494728 ARFGAP1Q8N6T3 406 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 OR2AP1Q8NGE2 309 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 ISG20Q96AZ6 181 aaKnown RBP11.83□□□□□ -0.52
VTI1A-208ENST00000494728 EXOC2Q96KP1 924 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 PEBP4Q96S96 227 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 MAGEH1Q9H213 219 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 KLHL11Q9NVR0 708 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 FZD10Q9ULW2 581 aa11.83□□□□□ -0.52
VTI1A-208ENST00000494728 BOD1L1Q8NFC6 3051 aa11.82□□□□□ -0.52
VTI1A-208ENST00000494728 IGLON5A6NGN9 336 aa11.82□□□□□ -0.52
VTI1A-208ENST00000494728 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
VTI1A-208ENST00000494728 A6NNZ2 444 aa11.82□□□□□ -0.52
VTI1A-208ENST00000494728 AREL1O15033 823 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms