RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 C20orf96Q9NUD7 363 aaPredicted RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 DLGAP2Q9P1A6 1054 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 LRFN2Q9ULH4 789 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 SLC27A5Q9Y2P5 690 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 NYNRINQ9P2P1 1898 aaKnown RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 FAM92AA1XBS5 289 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 PRR5-ARHGAP8B1AHC4 643 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 PLIN3O60664 434 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 GSRP00390 522 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 HLA-DQB2P05538 268 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 LIMK2P53671 638 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 ARHGAP8P85298 464 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 FASTKD1Q53R41 847 aaKnown RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 PPM1JQ5JR12 505 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 LRRC49Q8IUZ0 686 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 POU5F2Q8N7G0 328 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 AZIN2Q96A70 460 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 ATXN7L3BQ96GX2 97 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 KIFC1Q9BW19 673 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 SNX15Q9NRS6 342 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 RBM22Q9NW64 420 aaKnown RBP eCLIP13.97□□□□□ -0.17
VCP-207ENST00000493886 CORO1CQ9ULV4 474 aaPredicted RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 N6AMT1Q9Y5N5 214 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 TBX18O95935 607 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 GEMP55040 296 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 INSCQ1MX18 579 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 CMC1Q7Z7K0 106 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 ZNF683Q8IZ20 524 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 CFAP61Q8NHU2 1237 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 SEPT8Q92599 483 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 ISL2Q96A47 359 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 NOL6Q9H6R4 1146 aaKnown RBP13.96□□□□□ -0.17
VCP-207ENST00000493886 FNIP2Q9P278 1114 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 IPO11Q9UI26 975 aaKnown RBP13.96□□□□□ -0.17
VCP-207ENST00000493886 TET1Q8NFU7 2136 aa13.96□□□□□ -0.17
VCP-207ENST00000493886 DYTNA2CJ06 578 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 MTMR11A4FU01 709 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.18
VCP-207ENST00000493886 DNAJC6O75061 913 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 SNNO75324 88 aaPredicted RBP13.96□□□□□ -0.18
VCP-207ENST00000493886 MAGEA12P43365 314 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 KLC1Q07866 573 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 STX3Q13277 289 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 MS4A13Q5J8X5 152 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 CWF19L1Q69YN2 538 aaKnown RBP13.96□□□□□ -0.18
VCP-207ENST00000493886 FSTL4Q6MZW2 842 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 RSPO2Q6UXX9 243 aaPredicted RBP13.96□□□□□ -0.18
VCP-207ENST00000493886 KBTBD2Q8IY47 623 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 ZNF778Q96MU6 729 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 TTC1Q99614 292 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 SEPT5Q99719 369 aaPredicted RBP13.96□□□□□ -0.18
VCP-207ENST00000493886 FICDQ9BVA6 458 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 CRISPLD1Q9H336 500 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 PRDM5Q9NQX1 630 aaPredicted RBP13.96□□□□□ -0.18
VCP-207ENST00000493886 IARS2Q9NSE4 1012 aaKnown RBP13.96□□□□□ -0.18
VCP-207ENST00000493886 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.96□□□□□ -0.18
VCP-207ENST00000493886 CLIC5Q9NZA1 410 aa13.96□□□□□ -0.18
VCP-207ENST00000493886 CCDC78A2IDD5 438 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 NT5C1B-RDH14C9J2C7 533 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 MYCLP1P12525 358 aaPredicted RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 SERPINB8P50452 374 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 TAF10Q12962 218 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 GPR17Q13304 367 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 PSMD5Q16401 504 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 TFAP2DQ7Z6R9 452 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 CRLF3Q8IUI8 442 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 ATP6V0D2Q8N8Y2 350 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 SPPL2BQ8TCT7 592 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 ITM2AO43736 263 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 BAG2O95816 211 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 LMNAP02545 664 aaKnown RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 PRKCGP05129 697 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 RHOQP17081 205 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 PBX3P40426 434 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 CSE1LP55060 971 aaKnown RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 TRIP4Q15650 581 aaPredicted RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 TCTN1Q2MV58 587 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 ANO4Q32M45 955 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 PCID2Q5JVF3 399 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 RTP2Q5QGT7 225 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 DENND5AQ6IQ26 1287 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 RNF19BQ6ZMZ0 732 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 SDCCAG8Q86SQ7 713 aaPredicted RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 MIB1Q86YT6 1006 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 UMODL1-AS1Q8N2C9 162 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 PPP1R2P1Q96PQ5 205 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 ZYG11BQ9C0D3 744 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 TLR8Q9NR97 1041 aaKnown RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 OLA1Q9NTK5 396 aaKnown RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 TMEM216Q9P0N5 145 aa13.95□□□□□ -0.18
VCP-207ENST00000493886 HBS1LQ9Y450 684 aaKnown RBP13.95□□□□□ -0.18
VCP-207ENST00000493886 A6NHS1 94 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 GOLGA8TH3BQL2 631 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 VNN2O95498 520 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PROCP04070 461 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 ACADSP16219 412 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 ADRA1AP35348 466 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms