RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 RPS6KC1Q96S38 1066 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 ZPBPQ9BS86 351 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 NTPCRQ9BSD7 190 aaKnown RBP4.02□□□□□ -1.77
CD46-217ENST00000493796 PAGR1Q9BTK6 254 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 IFT27Q9BW83 186 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 POLDIP3Q9BY77 421 aaKnown RBP4.02□□□□□ -1.77
CD46-217ENST00000493796 KLHL31Q9H511 634 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 HIF1ANQ9NWT6 349 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 NCKIPSDQ9NZQ3 722 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 PLEKHB1Q9UF11 243 aaPredicted RBP4.02□□□□□ -1.77
CD46-217ENST00000493796 RAP2CQ9Y3L5 183 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 PTPRTO14522 1441 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 MST1RQ04912 1400 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 XIRP1Q702N8 1843 aaKnown RBP4.02□□□□□ -1.77
CD46-217ENST00000493796 SPATA31D1Q6ZQQ2 1576 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 ANKRD30AQ9BXX3 1397 aa4.02□□□□□ -1.77
CD46-217ENST00000493796 ERVK-7P63135 1459 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 EVPLQ92817 2033 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 C17orf100A8MU93 164 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 INAFM1C9JVW0 142 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 I6L893 689 aaPredicted RBP4.01□□□□□ -1.77
CD46-217ENST00000493796 RGS14O43566 566 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 SPRY3O43610 288 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 TSPY4P0CV99 314 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 TSPY10P0CW01 314 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 ADD2P35612 726 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 KCNJ4P48050 445 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 RFX5P48382 616 aaPredicted RBP4.01□□□□□ -1.77
CD46-217ENST00000493796 TRAPPC10P48553 1259 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 AARSP49588 968 aaKnown RBP eCLIP4.01□□□□□ -1.77
CD46-217ENST00000493796 ENTPD1P49961 510 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 MVDP53602 400 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 TMPRSS3P57727 454 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 ZP1P60852 638 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 GPS2Q13227 327 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 IDI1Q13907 227 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 SYTL3Q4VX76 610 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 RUNDC3AQ59EK9 446 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 ZNF484Q5JVG2 852 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 FAM83BQ5T0W9 1011 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 PDXDC1Q6P996 788 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 CADM3Q8N126 398 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 HORMAD2Q8N7B1 307 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 PRR26Q8N8Z3 221 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 SCAIQ8N9R8 606 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 ZNF333Q96JL9 665 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 TEFMQ96QE5 360 aaKnown RBP4.01□□□□□ -1.77
CD46-217ENST00000493796 DCLK3Q9C098 648 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 RMI1Q9H9A7 625 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 CHODLQ9H9P2 273 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 KIF17Q9P2E2 1029 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 CDH22Q9UJ99 828 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 MYO6Q9UM54 1294 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 ICKQ9UPZ9 632 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 RIPOR2Q9Y4F9 1068 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 COMMD10Q9Y6G5 202 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 ERBINQ96RT1 1412 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 NEURL4Q96JN8 1562 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 NUP155O75694 1391 aa4.01□□□□□ -1.77
CD46-217ENST00000493796 MYO3AQ8NEV4 1616 aa4□□□□□ -1.77
CD46-217ENST00000493796 PPLO60437 1756 aa4□□□□□ -1.77
CD46-217ENST00000493796 A0A1B0GVT2 93 aa4□□□□□ -1.77
CD46-217ENST00000493796 C17orf102A2RUQ5 167 aa4□□□□□ -1.77
CD46-217ENST00000493796 SAC3D1A6NKF1 404 aa4□□□□□ -1.77
CD46-217ENST00000493796 OR6C75A6NL08 312 aa4□□□□□ -1.77
CD46-217ENST00000493796 GTPBP1O00178 669 aaKnown RBP4□□□□□ -1.77
CD46-217ENST00000493796 METTL18O95568 372 aa4□□□□□ -1.77
CD46-217ENST00000493796 LDHAP00338 332 aaKnown RBP4□□□□□ -1.77
CD46-217ENST00000493796 TK1P04183 234 aa4□□□□□ -1.77
CD46-217ENST00000493796 HOXC6P09630 235 aa4□□□□□ -1.77
CD46-217ENST00000493796 MYZAPP0CAP1 466 aa4□□□□□ -1.77
CD46-217ENST00000493796 AVPR1AP37288 418 aa4□□□□□ -1.77
CD46-217ENST00000493796 GRK6P43250 576 aa4□□□□□ -1.77
CD46-217ENST00000493796 PPP3CCP48454 512 aa4□□□□□ -1.77
CD46-217ENST00000493796 CLCNKBP51801 687 aa4□□□□□ -1.77
CD46-217ENST00000493796 ZXDBP98169 803 aa4□□□□□ -1.77
CD46-217ENST00000493796 BIRC2Q13490 618 aa4□□□□□ -1.77
CD46-217ENST00000493796 SLC4A8Q2Y0W8 1093 aa4□□□□□ -1.77
CD46-217ENST00000493796 KLHL22Q53GT1 634 aa4□□□□□ -1.77
CD46-217ENST00000493796 OTUD1Q5VV17 481 aaPredicted RBP4□□□□□ -1.77
CD46-217ENST00000493796 TMEM268Q5VZI3 342 aa4□□□□□ -1.77
CD46-217ENST00000493796 HEPHL1Q6MZM0 1159 aa4□□□□□ -1.77
CD46-217ENST00000493796 TRILQ7L0X0 811 aa4□□□□□ -1.77
CD46-217ENST00000493796 TRIM74Q86UV6 250 aa4□□□□□ -1.77
CD46-217ENST00000493796 TRIM73Q86UV7 250 aa4□□□□□ -1.77
CD46-217ENST00000493796 WDR5BQ86VZ2 330 aa4□□□□□ -1.77
CD46-217ENST00000493796 ZDHHC23Q8IYP9 409 aa4□□□□□ -1.77
CD46-217ENST00000493796 IQCF1Q8N6M8 205 aa4□□□□□ -1.77
CD46-217ENST00000493796 LINS1Q8NG48 757 aa4□□□□□ -1.77
CD46-217ENST00000493796 CATSPERBQ9H7T0 1116 aa4□□□□□ -1.77
CD46-217ENST00000493796 LRP12Q9Y561 859 aa4□□□□□ -1.77
CD46-217ENST00000493796 RAI2Q9Y5P3 530 aa4□□□□□ -1.77
CD46-217ENST00000493796 PTGDR2Q9Y5Y4 395 aa4□□□□□ -1.77
CD46-217ENST00000493796 SPATA31E1Q6ZUB1 1445 aa4□□□□□ -1.77
CD46-217ENST00000493796 ASXL1Q8IXJ9 1541 aa4□□□□□ -1.77
CD46-217ENST00000493796 ZC3H13Q5T200 1668 aaKnown RBP4□□□□□ -1.77
CD46-217ENST00000493796 MS4A18H0YCH9 400 aa3.99□□□□□ -1.77
CD46-217ENST00000493796 HSPB6O14558 160 aa3.99□□□□□ -1.77
CD46-217ENST00000493796 RNMTO43148 476 aaKnown RBP3.99□□□□□ -1.77
CD46-217ENST00000493796 SLC28A2O43868 658 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms