RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CARD16Q5EG05 197 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 ANKRD20A2Q5SQ80 823 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 ANKRD20A1Q5TYW2 823 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 ANKRD20A3Q5VUR7 823 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 ALG1LQ6GMV1 187 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 PID1Q7Z2X4 250 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 DSG4Q86SJ6 1040 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 KLHL7Q8IXQ5 586 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 CHPFQ8IZ52 775 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 MMGT1Q8N4V1 131 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 OR2AP1Q8NGE2 309 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 USP33Q8TEY7 942 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 CYB5D2Q8WUJ1 264 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
SNX17-208ENST00000493711 TUBGCP5Q96RT8 1024 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 KRT12Q99456 494 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 MGME1Q9BQP7 344 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 DDX47Q9H0S4 455 aaKnown RBP12.62□□□□□ -0.39
SNX17-208ENST00000493711 SLC25A51Q9H1U9 297 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 TMEM245Q9H330 911 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 TBC1D17Q9HA65 648 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 PCDH9Q9HC56 1237 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 SLCO3A1Q9UIG8 710 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 STON1Q9Y6Q2 735 aa12.62□□□□□ -0.39
SNX17-208ENST00000493711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 CHURC1-FNTBB4DL54 471 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 ZBTB24O43167 697 aaPredicted RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 SYNCRIPO60506 623 aaKnown RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 POP4O95707 220 aaKnown RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 IFNB1P01574 187 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 CHRNB1P11230 501 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 TARSP26639 723 aaKnown RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 FDFT1P37268 417 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 KCNJ1P48048 391 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 STK19P49842 368 aaPredicted RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 ZBTB17Q13105 803 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 PARP6Q2NL67 630 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 EGFLAMQ63HQ2 1017 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 TTC27Q6P3X3 843 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 LEKR1Q6ZMV7 388 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 ZNF567Q8N184 647 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 FRS2Q8WU20 508 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 SORCS1Q8WY21 1168 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 EZH1Q92800 747 aaPredicted RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 CLDN23Q96B33 292 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 FCRL5Q96RD9 977 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 NUDCD1Q96RS6 583 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 GABRG3Q99928 467 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 CARD6Q9BX69 1037 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 GBA3Q9H227 469 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 GLOD4Q9HC38 313 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 NT5MQ9NPB1 228 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 VPS45Q9NRW7 570 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 LHX3Q9UBR4 397 aa12.61□□□□□ -0.39
SNX17-208ENST00000493711 AAR2Q9Y312 384 aaKnown RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
SNX17-208ENST00000493711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 A0A1W2PQ67 120 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 ERI2A8K979 691 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 TTC34A8MYJ7 566 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 WASH3PC4AMC7 463 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 K7ERQ8 282 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 SMAD6O43541 496 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 RNASEH1O60930 286 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 RNF40O75150 1001 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 KLF8O95600 359 aaPredicted RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 KRT14P02533 472 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 PRNPP04156 253 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 EPHX1P07099 455 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 SERPINF2P08697 491 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 CD72P21854 359 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 GEMP55040 296 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 SEC13P55735 322 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 NHLH1Q02575 133 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 ITKQ08881 620 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 C2orf54Q08AI8 447 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 SFSWAPQ12872 951 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 CAMK2GQ13555 558 aaPredicted RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 PTK6Q13882 451 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 ELAVL3Q14576 367 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 MYLK3Q32MK0 819 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 C2orf27AQ580R0 203 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 SRLQ86TD4 932 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 CNTD1Q8N815 330 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 IL17RCQ8NAC3 791 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 TSEN2Q8NCE0 465 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 PJA1Q8NG27 643 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 OR8D1Q8WZ84 308 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 KCTD12Q96CX2 325 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 MYO19Q96H55 970 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 HEPHQ9BQS7 1158 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 OSBPL1AQ9BXW6 950 aa12.6□□□□□ -0.39
SNX17-208ENST00000493711 CPEB1Q9BZB8 566 aaKnown RBP12.6□□□□□ -0.39
SNX17-208ENST00000493711 RAB17Q9H0T7 212 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms