RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 FKBP1CQ5VVH2 108 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 PPP1R16AQ96I34 528 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 S100A13Q99584 98 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 KLQ9UEF7 1012 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 TBC1D30Q9Y2I9 924 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 TLX1P31314 330 aaPredicted RBP20.32■□□□□ 0.84
RNF40-203ENST00000493683 HNRNPH3P31942 346 aaKnown RBP20.32■□□□□ 0.84
RNF40-203ENST00000493683 RAB10P61026 200 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 LY6KQ17RY6 165 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 ZSWIM7Q19AV6 140 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 FBXO30Q8TB52 745 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 VMP1Q96GC9 406 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 KCNMB3Q9NPA1 279 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 OR12D3Q9UGF7 316 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
RNF40-203ENST00000493683 BBIP1A8MTZ0 92 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 RCVRNP35243 200 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 RPL22P35268 128 aaKnown RBP20.32■□□□□ 0.84
RNF40-203ENST00000493683 SLC20A2Q08357 652 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 LIPMQ5VYY2 423 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 C16orf46Q6P387 395 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 IZUMO1Q8IYV9 350 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 DNAJB3Q8WWF6 145 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 NELL1Q92832 810 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 TBCDQ9BTW9 1192 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 TNFSF13BQ9Y275 285 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 KIAA1210Q9ULL0 1709 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 CYP3A7-CYP3A51PA0A087WV96 503 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 UBE2QL1A1L167 161 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 MAGEC1O60732 1142 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 CCDC166P0CW27 439 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 CYP3A7P24462 503 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 GRIA4P48058 902 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 AIF1P55008 147 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 COPZ1P61923 177 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 NRF1Q16656 503 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 SETMARQ53H47 684 aaPredicted RBP20.32■□□□□ 0.84
RNF40-203ENST00000493683 SLC30A10Q6XR72 485 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 OFCC1Q8IZS5 231 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 EEF1AKMT1Q8WVE0 214 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 CD101Q93033 1021 aa20.32■□□□□ 0.84
RNF40-203ENST00000493683 SEC24AO95486 1093 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 PLK1P53350 603 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 TTC7BQ86TV6 843 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 OR52K1Q8NGK4 314 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 EBNA1BP2Q99848 306 aaKnown RBP20.31■□□□□ 0.84
RNF40-203ENST00000493683 ERGIC3Q9Y282 383 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 POMCP01189 267 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 NPR3P17342 541 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 UNC5AQ6ZN44 842 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 ADAMTSL2Q86TH1 951 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 SPATA20Q8TB22 786 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 BAP1Q92560 729 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 TRMOQ9BU70 441 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 TDRKHQ9Y2W6 561 aaKnown RBP20.31■□□□□ 0.84
RNF40-203ENST00000493683 MFHAS1Q9Y4C4 1052 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 ANKRD63C9JTQ0 380 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 MGRN1O60291 552 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 XYLBO75191 536 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 MAPKAPK2P49137 400 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 BNC1Q01954 994 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 BST1Q10588 318 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 FAM171A1Q5VUB5 890 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 PAGE2Q7Z2X7 111 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 KIFC1Q9BW19 673 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 TIMM13Q9Y5L4 95 aaPredicted RBP20.31■□□□□ 0.84
RNF40-203ENST00000493683 FSCN2O14926 492 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 PTPN1P18031 435 aaKnown RBP20.31■□□□□ 0.84
RNF40-203ENST00000493683 CDH8P55286 799 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 SLC25A3Q00325 362 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 ROR2Q01974 943 aaKnown RBP20.31■□□□□ 0.84
RNF40-203ENST00000493683 FAM220AQ7Z4H9 259 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.31■□□□□ 0.84
RNF40-203ENST00000493683 OTCP00480 354 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 CRATP43155 626 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 POLD2P49005 469 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 CLK2P49760 499 aaKnown RBP20.31■□□□□ 0.84
RNF40-203ENST00000493683 USP46P62068 366 aa20.31■□□□□ 0.84
RNF40-203ENST00000493683 IRGMA1A4Y4 181 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 CCDC182A6NF36 153 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 CBFA2T3O75081 653 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 ALOX5P09917 674 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 IDO1P14902 403 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 TPP2P29144 1249 aaPredicted RBP20.3■□□□□ 0.84
RNF40-203ENST00000493683 EPHX2P34913 555 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 TGFBR2P37173 567 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 GSSP48637 474 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 HNMTP50135 292 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 PRKG2Q13237 762 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 TCEA2Q15560 299 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 LRRC55Q6ZSA7 311 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 ETAA1Q9NY74 926 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 MARCH2Q9P0N8 246 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 IKZF3Q9UKT9 509 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 UMPSP11172 480 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 AKR1A1P14550 325 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 PPP3CAQ08209 521 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 CORO1CQ9ULV4 474 aaPredicted RBP20.3■□□□□ 0.84
RNF40-203ENST00000493683 ULK1O75385 1050 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 SHBGP04278 402 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms