RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 ZNF75DP51815 510 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 AFF3P51826 1226 aaKnown RBP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 RACK1P63244 317 aaKnown RBP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 ZNF284Q2VY69 593 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 HLA-BQ31612 363 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 MYLK3Q32MK0 819 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TMEM259Q4ZIN3 620 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 BOLA3Q53S33 107 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 N4BP2L1Q5TBK1 243 aaPredicted RBP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3GQ6DHY5 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3CQ6IPX1 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 ERN2Q76MJ5 926 aaKnown RBP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3Q8IZP1 549 aaPredicted RBP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 HSPH1Q92598 858 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 CAMK1GQ96NX5 476 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 ZDHHC6Q9H6R6 413 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 CA5BQ9Y2D0 317 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 ANKRD6Q9Y2G4 727 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 FADS3Q9Y5Q0 445 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 LRRK1Q38SD2 2015 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ANKRD36A6QL64 1941 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ZSCAN5CA6NGD5 496 aaPredicted RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 AKR1B15C9JRZ8 316 aaPredicted RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 VILLO15195 856 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 BUB1BO60566 1050 aaPredicted RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 RNGTTO60942 597 aaKnown RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 MTA2O94776 668 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 SYPP08247 313 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ADRB1P08588 477 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ADRB3P13945 408 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ITIH2P19823 946 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 FECHP22830 423 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 MAT2AP31153 395 aaKnown RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 DNA2P51530 1060 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 GEMIN4P57678 1058 aaKnown RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 SFSWAPQ12872 951 aaKnown RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 TCEAL1Q15170 157 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 SEL1L3Q68CR1 1132 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 PSAPL1Q6NUJ1 521 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ZSWIM9Q86XI8 627 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 SPATS2Q86XZ4 545 aaKnown RBP13.86□□□□□ -0.19
PDCD11-206ENST00000493610 TMEM145Q8NBT3 493 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 DEFB124Q8NES8 71 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 EXOC2Q96KP1 924 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 CCDC114Q96M63 670 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 NCAPGQ9BPX3 1015 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 TRIM5Q9C035 493 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 ZDHHC5Q9C0B5 715 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 GAREM1Q9H706 876 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 PREBQ9HCU5 417 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 UVRAGQ9P2Y5 699 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 HPCAL4Q9UM19 191 aa13.86□□□□□ -0.19
PDCD11-206ENST00000493610 TRPM6Q9BX84 2022 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 A0A1W2PQU0 124 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 C16orf96A6NNT2 1141 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 H0Y8X5 98 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 MYO1FO00160 1098 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 AREL1O15033 823 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 OPHN1O60890 802 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 CBFA2T3O75081 653 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 LCA5LO95447 670 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 POP4O95707 220 aaKnown RBP13.85□□□□□ -0.19
PDCD11-206ENST00000493610 ZNF135P52742 658 aaPredicted RBP13.85□□□□□ -0.19
PDCD11-206ENST00000493610 DPYSL3Q14195 570 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 ZNF805Q5CZA5 627 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 CNGA4Q8IV77 575 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
PDCD11-206ENST00000493610 PCDH19Q8TAB3 1148 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 BAHD1Q8TBE0 780 aaPredicted RBP13.85□□□□□ -0.19
PDCD11-206ENST00000493610 SLC35G2Q8TBE7 412 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 KLK6Q92876 244 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 FAF2Q96CS3 445 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 KLHL32Q96NJ5 620 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 CTTNBP2NLQ9P2B4 639 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 UBA2Q9UBT2 640 aaPredicted RBP13.85□□□□□ -0.19
PDCD11-206ENST00000493610 TFR2Q9UP52 801 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 ITM2BQ9Y287 266 aa13.85□□□□□ -0.19
PDCD11-206ENST00000493610 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
PDCD11-206ENST00000493610 CABIN1Q9Y6J0 2220 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 TSPAN11A1L157 253 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 ARHGAP42A6NI28 874 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 C3orf70A6NLC5 250 aaPredicted RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 H3BRJ5 948 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 KRIT1O00522 736 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 RAD51BO15315 384 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 AP1G1O43747 822 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 AKR1B10O60218 316 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 SH3BP5O60239 455 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 MAFKO60675 156 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 PIGNO95427 931 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 UGT2B4P06133 528 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 ZNF883P0CG24 379 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 TIMP2P16035 220 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms