RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PAFAH1B3Q15102 231 aaKnown RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 LLGL1Q15334 1064 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 TTC31Q49AM3 519 aaPredicted RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 SPDYCQ5MJ68 293 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 C9orf64Q5T6V5 341 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 VSIG1Q86XK7 387 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 TMPRSS6Q8IU80 811 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 RYBPQ8N488 228 aaPredicted RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 PCDH20Q8N6Y1 951 aaKnown RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 UBL4BQ8N7F7 174 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 DEFB124Q8NES8 71 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 EXD1Q8NHP7 514 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 FRS2Q8WU20 508 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 RLN3Q8WXF3 142 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 OR8D1Q8WZ84 308 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 PRCCQ92733 491 aaPredicted RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 PTPRN2Q92932 1015 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 SIPA1Q96FS4 1042 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 SCNM1Q9BWG6 230 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 TM6SF2Q9BZW4 377 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 CEP44Q9C0F1 390 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 PDFQ9HBH1 243 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 IPO11Q9UI26 975 aaKnown RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 PACSIN2Q9UNF0 486 aaPredicted RBP11.79□□□□□ -0.52
CTSA-209ENST00000493522 CYP8B1Q9UNU6 501 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 LRRK1Q38SD2 2015 aa11.79□□□□□ -0.52
CTSA-209ENST00000493522 AKAP13Q12802 2813 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 BAHCC1Q9P281 2608 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 CXorf51AA0A1B0GTR3 108 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 MIF4GDA9UHW6 222 aaKnown RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 J3KR12 359 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 ZSCAN12O43309 604 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 ZRANB2O95218 330 aaKnown RBP eCLIP11.78□□□□□ -0.524e-10■■■■■ 65.3
CTSA-209ENST00000493522 IL1BP01584 269 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 DNTTP04053 509 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 ACADMP11310 421 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 HOXD12P35452 270 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 CDKN2BP42772 138 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 PTGER3P43115 390 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 ATXN3P54252 364 aaPredicted RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 RWDD2BP57060 319 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 RHOAP61586 193 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 RPS14P62263 151 aaKnown RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 GBE1Q04446 702 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 IL10RBQ08334 325 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 TFDP3Q5H9I0 405 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 LYSMD4Q5XG99 296 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 KAZNQ674X7 775 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 ARMCX6Q7L4S7 300 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 DSG4Q86SJ6 1040 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 METTL3Q86U44 580 aaKnown RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 MMAAQ8IVH4 418 aaKnown RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 TMEFF1Q8IYR6 380 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 RCOR2Q8IZ40 523 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 PLD5Q8N7P1 536 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 GRIN3AQ8TCU5 1115 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 CASKIN2Q8WXE0 1202 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 CINPQ9BW66 212 aaPredicted RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 TMEM121BQ9BXQ6 578 aaPredicted RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 RSPH9Q9H1X1 276 aaPredicted RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 CD93Q9NPY3 652 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
CTSA-209ENST00000493522 PCDHA3Q9Y5H8 950 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 HEY1Q9Y5J3 304 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 DOCK9Q9BZ29 2069 aa11.78□□□□□ -0.52
CTSA-209ENST00000493522 DSPP15924 2871 aaKnown RBP11.77□□□□□ -0.52
CTSA-209ENST00000493522 hCG_1818297A0A087WSY0 165 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 C1QTNF3-AMACRE9PGA6 284 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 ALOX15BO15296 676 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 CD160O95971 181 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 IGSF6O95976 241 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 GSRP00390 522 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 KRT10P13645 584 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 ZFXP17010 805 aaPredicted RBP11.77□□□□□ -0.53
CTSA-209ENST00000493522 ENGP17813 658 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 CETN2P41208 172 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 CCNHP51946 323 aaPredicted RBP11.77□□□□□ -0.53
CTSA-209ENST00000493522 SNRPD1P62314 119 aaKnown RBP11.77□□□□□ -0.53
CTSA-209ENST00000493522 GALNT2Q10471 571 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 TFDP2Q14188 446 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 ZNF235Q14590 738 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 CST6Q15828 149 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 PPP2R5EQ16537 467 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 CARD16Q5EG05 197 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 ATXN7L2Q5T6C5 722 aaPredicted RBP11.77□□□□□ -0.53
CTSA-209ENST00000493522 TMCO4Q5TGY1 634 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 SLC9A4Q6AI14 798 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 SLC23A3Q6PIS1 610 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 RABEPKQ7Z6M1 372 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 FAM124AQ86V42 546 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 HDDC3Q8N4P3 179 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 CHST14Q8NCH0 376 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 OR6K2Q8NGY2 324 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 CEP76Q8TAP6 659 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 GANCQ8TET4 914 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 NSMCE1Q8WV22 266 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms