RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	FIZ1	Q96SL8	496 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	SPRY4	Q9C004	299 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	TRIT1	Q9H3H1	467 aa	Known RBP	5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	MLXIPL	Q9NP71	852 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	ACSS2	Q9NR19	701 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	DYRK4	Q9NR20	520 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	FAM49B	Q9NUQ9	324 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	STOML2	Q9UJZ1	356 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	ZNF451	Q9Y4E5	1061 aa		5.5	□□□□□ -1.53
SEC13-219	ENST00000492602	PIPSL	A2A3N6	862 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	TYW5	A2RUC4	315 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602		B4E171	279 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	MCF2L	O15068	1137 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	B4GAT1	O43505	415 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	CD2BP2	O95400	341 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	KRT18	P05783	430 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	ALDH4A1	P30038	563 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	HNRNPH3	P31942	346 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	MAN1A1	P33908	653 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	TSPAN7	P41732	249 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	STAT5A	P42229	794 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	TOB1	P50616	345 aa	Predicted RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	BLK	P51451	505 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	ZNF131	P52739	623 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	LIMK2	P53671	638 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	OR1D5	P58170	312 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	PFN3	P60673	137 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	RPS21	P63220	83 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	B4GALNT1	Q00973	533 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	TLE4	Q04727	773 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	SGCG	Q13326	291 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	TRA2A	Q13595	282 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	CHRNA6	Q15825	494 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	ZNF630	Q2M218	657 aa	Predicted RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	TTC38	Q5R3I4	469 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	PAPD7	Q5XG87	772 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	CPZ	Q66K79	652 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	MCTP1	Q6DN14	999 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	HID1	Q8IV36	788 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	SFTPA2	Q8IWL1	248 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	RHOT1	Q8IXI2	618 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	ESX1	Q8N693	406 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	RBMXL3	Q8N7X1	1067 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	C4orf32	Q8N8J7	132 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	C12orf29	Q8N999	325 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	ST6GALNAC3	Q8NDV1	305 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	CHDH	Q8NE62	594 aa	Predicted RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	CHTF18	Q8WVB6	975 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	CDK5RAP3	Q96JB5	506 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	FEM1C	Q96JP0	617 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	MMTAG2	Q9BU76	263 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	EDEM3	Q9BZQ6	932 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	FOXP1	Q9H334	677 aa	Predicted RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	PCIF1	Q9H4Z3	704 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	SMYD3	Q9H7B4	428 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	SFMBT1	Q9UHJ3	866 aa		5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	COPG1	Q9Y678	874 aa	Known RBP	5.49	□□□□□ -1.53
SEC13-219	ENST00000492602	PRRC2A	P48634	2157 aa	Known RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602		A0A1B0GUH1	482 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	ARGFX	A6NJG6	315 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	ALOX15B	O15296	676 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	KCNN4	O15554	427 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	IRAK2	O43187	625 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	NUDT21	O43809	227 aa	Known RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	TBCA	O75347	108 aa	Known RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	CREG1	O75629	220 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	LATS1	O95835	1130 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	CTSL	P07711	333 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	EIF4A3	P38919	411 aa	Known RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	STAT1	P42224	750 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	HK3	P52790	923 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	YWHAG	P61981	247 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	RPS24	P62847	133 aa	Known RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	KCNA1	Q09470	495 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	FOXD4	Q12950	439 aa	Predicted RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	TRPC3	Q13507	836 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	SURF1	Q15526	300 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	PLEKHN1	Q494U1	663 aa	Predicted RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	TMEM198	Q66K66	360 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	KIAA1161	Q6NSJ0	714 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	CEACAM20	Q6UY09	585 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	SCARA5	Q6ZMJ2	495 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	DTHD1	Q6ZMT9	781 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602		Q6ZVU0	165 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	ERN2	Q76MJ5	926 aa	Known RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	GPBP1	Q86WP2	473 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	PARP9	Q8IXQ6	854 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	CFAP52	Q8N1V2	620 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	ARHGAP18	Q8N392	663 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	HJURP	Q8NCD3	748 aa	Predicted RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	FAM46D	Q8NEK8	389 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	RASSF8	Q8NHQ8	419 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	UBE2Q2	Q8WVN8	375 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	KCTD13	Q8WZ19	329 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	RNF34	Q969K3	372 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	TSACC	Q96A04	125 aa	Predicted RBP	5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	CENPT	Q96BT3	561 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	RNF31	Q96EP0	1072 aa		5.48	□□□□□ -1.53
SEC13-219	ENST00000492602	LENG8	Q96PV6	779 aa	Predicted RBP	5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms