RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	KBTBD6	Q86V97	674 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	PLPP6	Q8IY26	295 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	CCDC13	Q8IYE1	715 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	TOE1	Q96GM8	510 aa	Known RBP	13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	LGMN	Q99538	433 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	NEUROG2	Q9H2A3	272 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	NT5M	Q9NPB1	228 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	SEPT10	Q9P0V9	454 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	USP36	Q9P275	1121 aa	Known RBP	13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	LHX3	Q9UBR4	397 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	MBD1	Q9UIS9	605 aa	Predicted RBP	13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	SPAG17	Q6Q759	2223 aa		13.35	□□□□□ -0.27
AGAP3-223	ENST00000492234	FANCM	Q8IYD8	2048 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	GOLGA6L9	A6NEM1	432 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	FAM47DP	A6NHR8	397 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234		H7C0C1	242 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	KCNK3	O14649	394 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	MATN3	O15232	486 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	INSIG1	O15503	277 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	KIF5C	O60282	957 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	RHOBTB1	O94844	696 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	JCHAIN	P01591	159 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	CCNB1	P14635	433 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	MMP13	P45452	471 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	ATP5O	P48047	213 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	SCNN1B	P51168	640 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	METAP1	P53582	386 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	RPL6	Q02878	288 aa	Known RBP	13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	ELF2	Q15723	593 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	LPCAT2	Q7L5N7	544 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	SRL	Q86TD4	932 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	C11orf74	Q86VG3	221 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	ZC3H18	Q86VM9	953 aa	Known RBP	13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	TMEFF1	Q8IYR6	380 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	PAF1	Q8N7H5	531 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	HDAC11	Q96DB2	347 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	TSGA13	Q96PP4	275 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	GPR174	Q9BXC1	333 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	BTBD1	Q9H0C5	482 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	WSB2	Q9NYS7	404 aa	Predicted RBP	13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	EFR3B	Q9Y2G0	817 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	TTLL3	Q9Y4R7	772 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	WASF2	Q9Y6W5	498 aa		13.34	□□□□□ -0.27
AGAP3-223	ENST00000492234	TTC24	A2A3L6	582 aa	Predicted RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	USP27X	A6NNY8	438 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PEX11B	O96011	259 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	UGT2B4	P06133	528 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PECAM1	P16284	738 aa	Predicted RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	MSN	P26038	577 aa	Known RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PTPN7	P35236	360 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	NBL1	P41271	181 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	RGR	P47804	291 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	DHPS	P49366	369 aa	Predicted RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	MAX	P61244	160 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PPID	Q08752	370 aa	Known RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	CCDC15	Q0P6D6	951 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	CNTN1	Q12860	1018 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	HNRNPD	Q14103	355 aa	Known RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PLK5	Q496M5	336 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	DCAF12L1	Q5VU92	463 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	GDPD4	Q6W3E5	623 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	USP30	Q70CQ3	517 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	AADAT	Q8N5Z0	425 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	OR14C36	Q8NHC7	312 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	TFB1M	Q8WVM0	346 aa	Known RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	NKD2	Q969F2	451 aa	Predicted RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	ARRDC3	Q96B67	414 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PPP1R16A	Q96I34	528 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	KLHL32	Q96NJ5	620 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PSKH2	Q96QS6	385 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PHOX2B	Q99453	314 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	HERPUD2	Q9BSE4	406 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	BRD8	Q9H0E9	1235 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	SEMA4A	Q9H3S1	761 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	SCUBE2	Q9NQ36	999 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	HAUS2	Q9NVX0	235 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	SERGEF	Q9UGK8	458 aa		13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.33	□□□□□ -0.28
AGAP3-223	ENST00000492234	PRR23A	A6NEV1	266 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	APOC4-APOC2	K7ER74	178 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	KCNK1	O00180	336 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	RNF103	O00237	685 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	ENC1	O14682	589 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	MUSK	O15146	869 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	PIGN	O95427	931 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	LMNA	P02545	664 aa	Known RBP	13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	APOC2	P02655	101 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	ACSL1	P33121	698 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	HSPA9	P38646	679 aa	Known RBP	13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	CSNK1D	P48730	415 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	GRM3	Q14832	879 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	CFAP58	Q5T655	872 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	FBXL19	Q6PCT2	694 aa		13.32	□□□□□ -0.28
AGAP3-223	ENST00000492234	ARMCX6	Q7L4S7	300 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms