RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 IGLV3-19P01714 112 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 PRNPP04156 253 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 UGT2B4P06133 528 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 C7P10643 843 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 C5AR1P21730 350 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 TGM2P21980 687 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 CD6P30203 668 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 ACSL1P33121 698 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 PTPN7P35236 360 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 MMP13P45452 471 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 COPS2P61201 443 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 MAXP61244 160 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 RPL6Q02878 288 aaKnown RBP14.62□□□□□ -0.07
HLA-F-229ENST00000489502 CNTN1Q12860 1018 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 RFTN1Q14699 578 aaPredicted RBP14.62□□□□□ -0.07
HLA-F-229ENST00000489502 PLK5Q496M5 336 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 CCDC181Q5TID7 509 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 CCDC13Q8IYE1 715 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 PGBD5Q8N414 524 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 CCNYQ8ND76 341 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 TRIM58Q8NG06 486 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 NSMCE1Q8WV22 266 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 OMDQ99983 421 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 FAM118BQ9BPY3 351 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 CEP41Q9BYV8 373 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 DMDP11532 3685 aa14.62□□□□□ -0.07
HLA-F-229ENST00000489502 EP300Q09472 2414 aaPredicted RBP14.62□□□□□ -0.07
HLA-F-229ENST00000489502 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 PRR23AA6NEV1 266 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 KCNK1O00180 336 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 PPP1R12AO14974 1030 aaPredicted RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 MAP3K13O43283 966 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 PPIDQ08752 370 aaKnown RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 AP1B1Q10567 949 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 ZBTB17Q13105 803 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 BYSLQ13895 437 aaKnown RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 RPS6KA1Q15418 735 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 MYLK3Q32MK0 819 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 MEI1Q5TIA1 1274 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 AGBL4Q5VU57 503 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 FAM46CQ5VWP2 391 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 PMS2CLQ68D20 193 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 TIGD7Q6NT04 549 aaPredicted RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 PARS2Q7L3T8 475 aaKnown RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 LRRC49Q8IUZ0 686 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 TMEFF1Q8IYR6 380 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 SUMF1Q8NBK3 374 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 TMIEQ8NEW7 156 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 MAML1Q92585 1016 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 NKD2Q969F2 451 aaPredicted RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 TSGA13Q96PP4 275 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 PSKH2Q96QS6 385 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 GPR174Q9BXC1 333 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 DUSP15Q9H1R2 295 aaPredicted RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 NEUROG2Q9H2A3 272 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 NT5MQ9NPB1 228 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 WSB2Q9NYS7 404 aaPredicted RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 SEPT10Q9P0V9 454 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 RAB23Q9ULC3 237 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 SCML1Q9UN30 329 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 TTLL3Q9Y4R7 772 aa14.61□□□□□ -0.07
HLA-F-229ENST00000489502 ARIH1Q9Y4X5 557 aaPredicted RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 RIF1Q5UIP0 2472 aaKnown RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 ATXN2Q99700 1313 aaKnown RBP14.61□□□□□ -0.07
HLA-F-229ENST00000489502 FAM47DPA6NHR8 397 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 APOC4-APOC2K7ER74 178 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 MATN3O15232 486 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 NDUFS2O75306 463 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 POP4O95707 220 aaKnown RBP14.6□□□□□ -0.07
HLA-F-229ENST00000489502 SEMA4FO95754 770 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 APOC2P02655 101 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 HLA-DQB2P05538 268 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 CCNCP24863 283 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 OXTRP30559 389 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 CETN2P41208 172 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 PTGER3P43115 390 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 DHPSP49366 369 aaPredicted RBP14.6□□□□□ -0.07
HLA-F-229ENST00000489502 ADPRHP54922 357 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 PDK1Q15118 436 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 ELF2Q15723 593 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 LRRC73Q5JTD7 316 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 PIP5KL1Q5T9C9 394 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 SEL1L2Q5TEA6 688 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 MARC1Q5VT66 337 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.6□□□□□ -0.07
HLA-F-229ENST00000489502 USP30Q70CQ3 517 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 SRLQ86TD4 932 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 C11orf74Q86VG3 221 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 ZC3H18Q86VM9 953 aaKnown RBP14.6□□□□□ -0.07
HLA-F-229ENST00000489502 SLC41A1Q8IVJ1 513 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 PLPP6Q8IY26 295 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 ACTL9Q8TC94 416 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 P3H4Q92791 437 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 NSMCE3Q96MG7 304 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 HSPA12BQ96MM6 686 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 KLHL32Q96NJ5 620 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 QKIQ96PU8 341 aaKnown RBP eCLIP14.6□□□□□ -0.07
HLA-F-229ENST00000489502 MGME1Q9BQP7 344 aa14.6□□□□□ -0.07
HLA-F-229ENST00000489502 TLR10Q9BXR5 811 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms