RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CTSLP07711 333 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 TNNT1P13805 278 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 MX2P20592 715 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 TGM1P22735 817 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 XPAP23025 273 aaPredicted RBP13.09□□□□□ -0.31
PHF1-210ENST00000488767 MAOBP27338 520 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 DRD3P35462 400 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 ID4P47928 161 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 CCR5P51681 352 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 DPYSL3Q14195 570 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 IFI16Q16666 785 aaKnown RBP13.09□□□□□ -0.31
PHF1-210ENST00000488767 SLC45A4Q5BKX6 768 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 TCEAL6Q6IPX3 200 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 PRPF39Q86UA1 669 aaKnown RBP13.09□□□□□ -0.31
PHF1-210ENST00000488767 VSIG1Q86XK7 387 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 ARHGAP12Q8IWW6 846 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 ZCCHC9Q8N567 271 aaKnown RBP13.09□□□□□ -0.31
PHF1-210ENST00000488767 NPWQ8N729 165 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 OR6K2Q8NGY2 324 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 TCEAL3Q969E4 200 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 RAB7BQ96AH8 199 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 BIRC7Q96CA5 298 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 GTPBP2Q9BX10 602 aaKnown RBP13.09□□□□□ -0.31
PHF1-210ENST00000488767 TMEM9BQ9NQ34 198 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 KLHL11Q9NVR0 708 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 SEPT3Q9UH03 358 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 SARDHQ9UL12 918 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 ACTL7AQ9Y615 435 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 ABCA7Q8IZY2 2146 aa13.09□□□□□ -0.31
PHF1-210ENST00000488767 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 BTNL10A8MVZ5 291 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 ZNF487B1APH4 448 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 PATE3B3GLJ2 98 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 J3KR12 359 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 UGT2B4P06133 528 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 ZFXP17010 805 aaPredicted RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 ENGP17813 658 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 COMTP21964 271 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 HSPA9P38646 679 aaKnown RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 LIMK1P53667 647 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 TAS2R40P59535 323 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 IRX4P78413 519 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 PUM1Q14671 1186 aaKnown RBP eCLIP13.08□□□□□ -0.32
PHF1-210ENST00000488767 LBRQ14739 615 aaKnown RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 SETMARQ53H47 684 aaPredicted RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 ZNF805Q5CZA5 627 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 ATXN7L2Q5T6C5 722 aaPredicted RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 AGBL4Q5VU57 503 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.32
PHF1-210ENST00000488767 NEK5Q6P3R8 708 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 IL27RAQ6UWB1 636 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 DAAM2Q86T65 1068 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 TMEM139Q8IV31 216 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 TSC1Q92574 1164 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 RTKNQ9BST9 563 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 KLC2Q9H0B6 622 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 ATP13A3Q9H7F0 1226 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 PDFQ9HBH1 243 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 WASF2Q9Y6W5 498 aa13.08□□□□□ -0.32
PHF1-210ENST00000488767 A0A1W2PPC4 97 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 PLK4O00444 970 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
PHF1-210ENST00000488767 PCDH8O95206 1070 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 CD48P09326 243 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 ADRB3P13945 408 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 KDELR1P24390 212 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 NFKBIAP25963 317 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 SERPINA4P29622 427 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 VAV2P52735 878 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 METAP1P53582 386 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 C21orf59P57076 290 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 RACK1P63244 317 aaKnown RBP13.07□□□□□ -0.32
PHF1-210ENST00000488767 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 ATP13A4Q4VNC1 1196 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 STPG1Q5TH74 334 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 MARC1Q5VT66 337 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 C11orf63Q6NUN7 778 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 TRIM69Q86WT6 500 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 CCDC112Q8NEF3 446 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 UBE2Q2Q8WVN8 375 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 ANP32BQ92688 251 aaKnown RBP13.07□□□□□ -0.32
PHF1-210ENST00000488767 FAM131CQ96AQ9 280 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 ARRDC3Q96B67 414 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 EXOC2Q96KP1 924 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 TUBGCP5Q96RT8 1024 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 CPEB1Q9BZB8 566 aaKnown RBP13.07□□□□□ -0.32
PHF1-210ENST00000488767 ETNK2Q9NVF9 386 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 DMTF1Q9Y222 760 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms