RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PJA2O43164 708 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 PSTPIP1O43586 416 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 NRDCO43847 1150 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 KRT1P04264 644 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 CFIP05156 583 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 RENBPP51606 427 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 METAP1P53582 386 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 ADPRHP54922 357 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 KIF5AQ12840 1032 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 GRM3Q14832 879 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 PAFAH1B3Q15102 231 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 SF3A2Q15428 464 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 CYTH1Q15438 398 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 TRIM61Q5EBN2 209 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 ATXN7L2Q5T6C5 722 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 PEAR1Q5VY43 1037 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 NCEH1Q6PIU2 408 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 ERN2Q76MJ5 926 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 BBS5Q8N3I7 341 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 CCDC112Q8NEF3 446 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 DNASE2BQ8WZ79 361 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 FAF2Q96CS3 445 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 RNF157Q96PX1 679 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 HDAC8Q9BY41 377 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 SMOC1Q9H4F8 434 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 EVLQ9UI08 416 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 REXO2Q9Y3B8 237 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 MFHAS1Q9Y4C4 1052 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 HYOU1Q9Y4L1 999 aa15.29■□□□□ 0.04
CXCL12-207ENST00000488591 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 TNRC6BQ9UPQ9 1833 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 FRYLO94915 3013 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 RCCD1A6NED2 376 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 PLK4O00444 970 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 PLRG1O43660 514 aaKnown RBP15.28■□□□□ 0.04
CXCL12-207ENST00000488591 ZFXP17010 805 aaPredicted RBP15.28■□□□□ 0.04
CXCL12-207ENST00000488591 MX2P20592 715 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 ITGB7P26010 798 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 MAOBP27338 520 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 CCR5P51681 352 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 LBRQ14739 615 aaKnown RBP15.28■□□□□ 0.04
CXCL12-207ENST00000488591 NCBP2-AS2Q69YL0 99 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 FBXL19Q6PCT2 694 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 SLC23A3Q6PIS1 610 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 GDPD4Q6W3E5 623 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 ARHGAP36Q6ZRI8 547 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 OR6K2Q8NGY2 324 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 TPCN2Q8NHX9 752 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 FAM131CQ96AQ9 280 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 ARRDC3Q96B67 414 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 BIRC7Q96CA5 298 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF830Q96NB3 372 aaPredicted RBP15.28■□□□□ 0.04
CXCL12-207ENST00000488591 LHX3Q9UBR4 397 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 SEPT3Q9UH03 358 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 EIF2B4Q9UI10 523 aaKnown RBP15.28■□□□□ 0.04
CXCL12-207ENST00000488591 SLC6A14Q9UN76 642 aa15.28■□□□□ 0.04
CXCL12-207ENST00000488591 GVINP1Q7Z2Y8 2422 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 A0A1B0GTW7 788 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 PATE3B3GLJ2 98 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 BCAT2O15382 392 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-207ENST00000488591 UGT2B4P06133 528 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 SERPINF2P08697 491 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 SDHBP21912 280 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 CD27P26842 260 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 CSNK1DP48730 415 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 NEK3P51956 506 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 NSUN2Q08J23 767 aaKnown RBP eCLIP15.27■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF235Q14590 738 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF805Q5CZA5 627 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 AGBL4Q5VU57 503 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 TIGD7Q6NT04 549 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-207ENST00000488591 NEK5Q6P3R8 708 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 TP53INP2Q8IXH6 220 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 KIAA1524Q8TCG1 905 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 RNF25Q96BH1 459 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-207ENST00000488591 DESI2Q9BSY9 194 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 CPEB1Q9BZB8 566 aaKnown RBP15.27■□□□□ 0.04
CXCL12-207ENST00000488591 LACRTQ9GZZ8 138 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 PREBQ9HCU5 417 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 DUSP10Q9Y6W6 482 aa15.27■□□□□ 0.04
CXCL12-207ENST00000488591 NUMA1Q14980 2115 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-207ENST00000488591 APOL1O14791 398 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 ARHGAP6O43182 974 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 MFSD11O43934 449 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 MAFKO60675 156 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
CXCL12-207ENST00000488591 IGHV4-34P06331 123 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 SYPP08247 313 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 GKP32189 559 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 NUDT1P36639 197 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 HSPA9P38646 679 aaKnown RBP15.26■□□□□ 0.03
CXCL12-207ENST00000488591 GARSP41250 739 aaKnown RBP15.26■□□□□ 0.03
CXCL12-207ENST00000488591 MAPK8P45983 427 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 IRX4P78413 519 aa15.26■□□□□ 0.03
CXCL12-207ENST00000488591 GALNT2Q10471 571 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms