RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 LPAL2Q16609 132 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 TAZQ16635 292 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 MYLK3Q32MK0 819 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 ZNF805Q5CZA5 627 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 MARC1Q5VT66 337 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 NEK5Q6P3R8 708 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 SPOCD1Q6ZMY3 1216 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 ASCL5Q7RTU5 278 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 FAM124AQ86V42 546 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 SYT12Q8IV01 421 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 CEP76Q8TAP6 659 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 FAM131CQ96AQ9 280 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
LIMS3-205ENST00000487150 ZNF419Q96HQ0 510 aaPredicted RBP14.86□□□□□ -0.03
LIMS3-205ENST00000487150 HSPA12BQ96MM6 686 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 ZNF641Q96N77 438 aaPredicted RBP14.86□□□□□ -0.03
LIMS3-205ENST00000487150 TSGA13Q96PP4 275 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 FERMT1Q9BQL6 677 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 GPR174Q9BXC1 333 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 CPEB1Q9BZB8 566 aaKnown RBP14.86□□□□□ -0.03
LIMS3-205ENST00000487150 GOLPH3Q9H4A6 298 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 ATP13A3Q9H7F0 1226 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 PREBQ9HCU5 417 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 VPS45Q9NRW7 570 aa14.86□□□□□ -0.03
LIMS3-205ENST00000487150 MYO18AQ92614 2054 aaKnown RBP14.85□□□□□ -0.03
LIMS3-205ENST00000487150 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.85□□□□□ -0.03
LIMS3-205ENST00000487150 BCLAF3A2AJT9 711 aaKnown RBP14.85□□□□□ -0.03
LIMS3-205ENST00000487150 PRR5-ARHGAP8B1AHC4 643 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 MTSS1O43312 755 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 CES1P23141 567 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 SERPINA4P29622 427 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 PTPN7P35236 360 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 ADPRHP54922 357 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 CREB5Q02930 508 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 ARSIQ5FYB1 569 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 CCDC181Q5TID7 509 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 FBXL19Q6PCT2 694 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 BRAT1Q6PJG6 821 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 LEKR1Q6ZMV7 388 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 ERN2Q76MJ5 926 aaKnown RBP14.85□□□□□ -0.03
LIMS3-205ENST00000487150 NT5DC3Q86UY8 548 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 TMEFF1Q8IYR6 380 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 AADATQ8N5Z0 425 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 PQLC3Q8N755 202 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 CHST14Q8NCH0 376 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 TRIM58Q8NG06 486 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 OR14C36Q8NHC7 312 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 HCAR2Q8TDS4 363 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 P3H4Q92791 437 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 PDLIM2Q96JY6 352 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 PHOX2BQ99453 314 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 NEUROG2Q9H2A3 272 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 DTLQ9NZJ0 730 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 DKK3Q9UBP4 350 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 LHX3Q9UBR4 397 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 GUCA1BQ9UMX6 200 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 WASF2Q9Y6W5 498 aa14.85□□□□□ -0.03
LIMS3-205ENST00000487150 FANCMQ8IYD8 2048 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 METTL12A8MUP2 240 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 MATN3O15232 486 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 ZSCAN12O43309 604 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 PLRG1O43660 514 aaKnown RBP14.84□□□□□ -0.03
LIMS3-205ENST00000487150 CTSLP07711 333 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 CA4P22748 312 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 MSNP26038 577 aaKnown RBP14.84□□□□□ -0.03
LIMS3-205ENST00000487150 DRD3P35462 400 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 MMP13P45452 471 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 CCR5P51681 352 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 GBE1Q04446 702 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 CYTH1Q15438 398 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 AGBL4Q5VU57 503 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 PEAR1Q5VY43 1037 aaPredicted RBP14.84□□□□□ -0.03
LIMS3-205ENST00000487150 KIAA0895LQ68EN5 471 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 MFSD7Q6UXD7 560 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 GDPD4Q6W3E5 623 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 PAF1Q8N7H5 531 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 PLD5Q8N7P1 536 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 C12orf50Q8NA57 414 aaPredicted RBP14.84□□□□□ -0.03
LIMS3-205ENST00000487150 CCNYQ8ND76 341 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 MGME1Q9BQP7 344 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 POLR1EQ9GZS1 481 aaKnown RBP14.84□□□□□ -0.03
LIMS3-205ENST00000487150 TRIM10Q9UDY6 481 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 SARDHQ9UL12 918 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 HEY1Q9Y5J3 304 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 ATG2BQ96BY7 2078 aa14.84□□□□□ -0.03
LIMS3-205ENST00000487150 hCG_1818297A0A087WSY0 165 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 GOLGA6L9A6NEM1 432 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 AP1G1O43747 822 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 CST8O60676 142 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 SOCS5O75159 536 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 TJP3O95049 919 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 UGT2B4P06133 528 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 ADRB3P13945 408 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 XPAP23025 273 aaPredicted RBP14.83□□□□□ -0.04
LIMS3-205ENST00000487150 ACSL1P33121 698 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 PTGER3P43115 390 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 LMNB2Q03252 620 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 BCL2L1Q07817 233 aa14.83□□□□□ -0.04
LIMS3-205ENST00000487150 PPIDQ08752 370 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms