RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 LONRF2Q1L5Z9 754 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 MYLK3Q32MK0 819 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 ARSIQ5FYB1 569 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 FAM46CQ5VWP2 391 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 DARS2Q6PI48 645 aaKnown RBP19.34■□□□□ 0.69
ATG9A-221ENST00000486766 WDR5BQ86VZ2 330 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 LONP2Q86WA8 852 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 TEX26Q8N6G2 289 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 PIP4K2CQ8TBX8 421 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 FERMT1Q9BQL6 677 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 CEP41Q9BYV8 373 aa19.34■□□□□ 0.69
ATG9A-221ENST00000486766 R3HDM2Q9Y2K5 976 aaKnown RBP19.34■□□□□ 0.69
ATG9A-221ENST00000486766 CEP192Q8TEP8 1941 aa19.33■□□□□ 0.69
ATG9A-221ENST00000486766 CCDC163A0A0D9SF12 145 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 KPNA3O00505 521 aaPredicted RBP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 MTSS1O43312 755 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 LEFTY1O75610 366 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 HLA-DQB2P05538 268 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 CTSLP07711 333 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 TCP1P17987 556 aaKnown RBP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 GKP32189 559 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 SLC8A1P32418 973 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 ETF1P62495 437 aaKnown RBP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 ZBTB16Q05516 673 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 NSUN2Q08J23 767 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 ZBTB17Q13105 803 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 POM121L1PQ3SYA9 428 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 SRLQ86TD4 932 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 PGBD5Q8N414 524 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 TMIEQ8NEW7 156 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 GANCQ8TET4 914 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 HTR3CQ8WXA8 447 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 SPACA7Q96KW9 195 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 C16orf45Q96MC5 204 aaPredicted RBP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 MGME1Q9BQP7 344 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 POLR1EQ9GZS1 481 aaKnown RBP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 PABPC3Q9H361 631 aaKnown RBP19.33■□□□□ 0.68
ATG9A-221ENST00000486766 SCUBE2Q9NQ36 999 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 ZSCAN32Q9NX65 697 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 AMACRQ9UHK6 382 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 SARDHQ9UL12 918 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 PPM1HQ9ULR3 514 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 SCML1Q9UN30 329 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 CYP8B1Q9UNU6 501 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 WASF2Q9Y6W5 498 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 FANCMQ8IYD8 2048 aa19.33■□□□□ 0.68
ATG9A-221ENST00000486766 H0Y858 1186 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 CES2O00748 559 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 INSIG1O15503 277 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 ZNF217O75362 1048 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 C5AR1P21730 350 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 RBL1P28749 1068 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 CASQ1P31415 396 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 CSNK1DP48730 415 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 SFSWAPQ12872 951 aaKnown RBP19.32■□□□□ 0.68
ATG9A-221ENST00000486766 BYSLQ13895 437 aaKnown RBP19.32■□□□□ 0.68
ATG9A-221ENST00000486766 GRM3Q14832 879 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 USP39Q53GS9 565 aaKnown RBP19.32■□□□□ 0.68
ATG9A-221ENST00000486766 SYT10Q6XYQ8 523 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 RASGEF1CQ8N431 466 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 PRSS33Q8NF86 280 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 COG1Q8WTW3 980 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 ATG4AQ8WYN0 398 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 ZNF419Q96HQ0 510 aaPredicted RBP19.32■□□□□ 0.68
ATG9A-221ENST00000486766 PPP1R16AQ96I34 528 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 LRIG1Q96JA1 1093 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 MS4A14Q96JA4 679 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 AGAP3Q96P47 875 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 NAP1L3Q99457 506 aaPredicted RBP19.32■□□□□ 0.68
ATG9A-221ENST00000486766 IL12RB2Q99665 862 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 OMDQ99983 421 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 OSBPL1AQ9BXW6 950 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 FRMD8P1Q9BZ68 369 aaPredicted RBP19.32■□□□□ 0.68
ATG9A-221ENST00000486766 C10orf88Q9H8K7 445 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 DYRK4Q9NR20 520 aa19.32■□□□□ 0.68
ATG9A-221ENST00000486766 TTC24A2A3L6 582 aaPredicted RBP19.31■□□□□ 0.68
ATG9A-221ENST00000486766 PGRMC1O00264 195 aaKnown RBP19.31■□□□□ 0.68
ATG9A-221ENST00000486766 KCNN4O15554 427 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 GJB3O75712 270 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 ZNF189O75820 626 aaPredicted RBP19.31■□□□□ 0.68
ATG9A-221ENST00000486766 STK10O94804 968 aaKnown RBP19.31■□□□□ 0.68
ATG9A-221ENST00000486766 PIGNO95427 931 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 UGT2B4P06133 528 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 PTPN3P26045 913 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 MAPK8P45983 427 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 TPMTP51580 245 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 AP1S1P61966 158 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 PAPD7Q5XG87 772 aaKnown RBP19.31■□□□□ 0.68
ATG9A-221ENST00000486766 HDDC3Q8N4P3 179 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 C1orf54Q8WWF1 131 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 RLN3Q8WXF3 142 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 NUDCD1Q96RS6 583 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 CPEB1Q9BZB8 566 aaKnown RBP19.31■□□□□ 0.68
ATG9A-221ENST00000486766 ATP13A3Q9H7F0 1226 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 CD93Q9NPY3 652 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 FBXL12Q9NXK8 326 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 KLHL8Q9P2G9 620 aaPredicted RBP19.31■□□□□ 0.68
ATG9A-221ENST00000486766 DNPEPQ9ULA0 475 aa19.31■□□□□ 0.68
ATG9A-221ENST00000486766 INVSQ9Y283 1065 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms