RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 RAD51BO15315 384 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 AQP9O43315 295 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 NEBLO76041 1014 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-227ENST00000485102 TFE3P19532 575 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-227ENST00000485102 TGM2P21980 687 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 ARF5P84085 180 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 DEUP1Q05D60 604 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 VAC14Q08AM6 782 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 ZNF542PQ5EBM4 170 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 PTAR1Q7Z6K3 402 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-227ENST00000485102 SLC47A2Q86VL8 602 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 MYO18BQ8IUG5 2567 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 TMEM35BQ8NCS4 154 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 OR7D4Q8NG98 312 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 GRIN3AQ8TCU5 1115 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 BTN2A2Q8WVV5 523 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 C18orf8Q96DM3 657 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 PRR11Q96HE9 360 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-227ENST00000485102 VCPIP1Q96JH7 1222 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 TNKS2Q9H2K2 1166 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 PIEZO2Q9H5I5 2752 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 SYNCQ9H7C4 482 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 CAAP1Q9H8G2 361 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 CPNE5Q9HCH3 593 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 KLF15Q9UIH9 416 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 ENTPD2Q9Y5L3 495 aa13.26□□□□□ -0.29
HDAC6-227ENST00000485102 NAV2Q8IVL1 2488 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 BIN1O00499 593 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 TOR1BO14657 336 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 FPGTO14772 594 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 KLK10O43240 276 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 SPINT1O43278 529 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 ENDOD1O94919 500 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 CD160O95971 181 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 MYF5P13349 255 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 ETFBP38117 255 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 SULT1E1P49888 294 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 CCNHP51946 323 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-227ENST00000485102 NRG1Q02297 640 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-227ENST00000485102 APBA1Q02410 837 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 GNA12Q03113 381 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 SGCGQ13326 291 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 ARHGAP40Q5TG30 622 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 PARS2Q7L3T8 475 aaKnown RBP13.25□□□□□ -0.29
HDAC6-227ENST00000485102 TFAP2DQ7Z6R9 452 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 CLEC14AQ86T13 490 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 IRF2BP1Q8IU81 584 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 VOPP1Q96AW1 172 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 ARHGEF26Q96DR7 871 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 NAF1Q96HR8 494 aaKnown RBP13.25□□□□□ -0.29
HDAC6-227ENST00000485102 TBCBQ99426 244 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 BOCQ9BWV1 1114 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 ZYG11BQ9C0D3 744 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 OSBPL2Q9H1P3 480 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 ATP13A1Q9HD20 1204 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 DNAJC12Q9UKB3 198 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 SNX10Q9Y5X0 201 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 MAST4O15021 2626 aa13.25□□□□□ -0.29
HDAC6-227ENST00000485102 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 B8ZZF3 427 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 LMO7DNF2Z398 122 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 K7ENP7 123 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 C6P13671 934 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 JUNDP17535 347 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 RBMS1P29558 406 aaKnown RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 RPIAP49247 311 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 RNASE9P60153 205 aaKnown RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 YPEL5P62699 121 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 EIF2B5Q13144 721 aaKnown RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 PDE1CQ14123 709 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 CDKN3Q16667 212 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 ZNF805Q5CZA5 627 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 GUSBP11Q6P575 273 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 INO80CQ6PI98 192 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 RBM44Q6ZP01 1051 aaKnown RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 XYLT1Q86Y38 959 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 GLMNQ92990 594 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 NAT6Q93015 286 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 CENPTQ96BT3 561 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 IL12RB2Q99665 862 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 SPON2Q9BUD6 331 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 HECAQ9UBI9 543 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 SPASTQ9UBP0 616 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 IPO11Q9UI26 975 aaKnown RBP13.24□□□□□ -0.29
HDAC6-227ENST00000485102 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 SATB2Q9UPW6 733 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 UNC13CQ8NB66 2214 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 TENM4Q6N022 2769 aa13.24□□□□□ -0.29
HDAC6-227ENST00000485102 CPED1A4D0V7 1026 aa13.23□□□□□ -0.29
HDAC6-227ENST00000485102 IGLON5A6NGN9 336 aa13.23□□□□□ -0.29
HDAC6-227ENST00000485102 AREL1O15033 823 aa13.23□□□□□ -0.29
HDAC6-227ENST00000485102 SRGAP2O75044 1071 aa13.23□□□□□ -0.29
HDAC6-227ENST00000485102 LSM8O95777 96 aaKnown RBP13.23□□□□□ -0.29
HDAC6-227ENST00000485102 FLT3P36888 993 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms