RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 NAP1L1P55209 391 aaKnown RBP27.06■■□□□ 1.92
SMDT1-203ENST00000484235 RAD51Q06609 339 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 ODF2Q5BJF6 829 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 ATXN7L2Q5T6C5 722 aaPredicted RBP27.06■■□□□ 1.92
SMDT1-203ENST00000484235 PRR23CQ6ZRP0 262 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 DAAM2Q86T65 1068 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 CEP76Q8TAP6 659 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 RTKNQ9BST9 563 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 HDAC8Q9BY41 377 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 ZDHHC6Q9H6R6 413 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 CDV3Q9UKY7 258 aaKnown RBP27.06■■□□□ 1.92
SMDT1-203ENST00000484235 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.06■■□□□ 1.92
SMDT1-203ENST00000484235 NUP205Q92621 2012 aa27.06■■□□□ 1.92
SMDT1-203ENST00000484235 CACNA1BQ00975 2339 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 FAM47DPA6NHR8 397 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 PLK4O00444 970 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 KIF5AQ12840 1032 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 AGBL4Q5VU57 503 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 NCBP2-AS2Q69YL0 99 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 NCEH1Q6PIU2 408 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 RABEPKQ7Z6M1 372 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 PQLC3Q8N755 202 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 CCDC112Q8NEF3 446 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 OR6K2Q8NGY2 324 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 DESI2Q9BSY9 194 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 OSBPL1AQ9BXW6 950 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 MAK16Q9BXY0 300 aaKnown RBP27.05■■□□□ 1.92
SMDT1-203ENST00000484235 GOLPH3Q9H4A6 298 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 SMOC1Q9H4F8 434 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 LHX3Q9UBR4 397 aa27.05■■□□□ 1.92
SMDT1-203ENST00000484235 LAMA1P25391 3075 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 DCDC2BA2VCK2 349 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 RNF103O00237 685 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 KHNYNO15037 678 aaKnown RBP27.04■■□□□ 1.92
SMDT1-203ENST00000484235 MAFKO60675 156 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 KRT1P04264 644 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 ITGB7P26010 798 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 MAOBP27338 520 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 SF3A2Q15428 464 aaKnown RBP27.04■■□□□ 1.92
SMDT1-203ENST00000484235 TMCO4Q5TGY1 634 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 KIAA0895LQ68EN5 471 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 ERN2Q76MJ5 926 aaKnown RBP27.04■■□□□ 1.92
SMDT1-203ENST00000484235 ATPAF2Q8N5M1 289 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 C12orf50Q8NA57 414 aaPredicted RBP27.04■■□□□ 1.92
SMDT1-203ENST00000484235 ARRDC3Q96B67 414 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 BIRC7Q96CA5 298 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 SUSD2Q9UGT4 822 aa27.04■■□□□ 1.92
SMDT1-203ENST00000484235 EVLQ9UI08 416 aaPredicted RBP27.04■■□□□ 1.92
SMDT1-203ENST00000484235 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.04■■□□□ 1.92
SMDT1-203ENST00000484235 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.04■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3DA0A087WVF3 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3IA0A087WXS9 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3EA0A087X179 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3KA0A087X1G2 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3FA6NER0 549 aaPredicted RBP27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3LB9A6J9 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 PLRG1O43660 514 aaKnown RBP27.03■■□□□ 1.92
SMDT1-203ENST00000484235 FSBPO95073 299 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3HP0C7X1 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 GNSP15586 552 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 GKP32189 559 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 NSUN2Q08J23 767 aaKnown RBP eCLIP27.03■■□□□ 1.92
SMDT1-203ENST00000484235 DUOXA1Q1HG43 343 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 PIP5KL1Q5T9C9 394 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3GQ6DHY5 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3CQ6IPX1 549 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TBC1D3Q8IZP1 549 aaPredicted RBP27.03■■□□□ 1.92
SMDT1-203ENST00000484235 KIAA1524Q8TCG1 905 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 VOPP1Q96AW1 172 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 RNF25Q96BH1 459 aaPredicted RBP27.03■■□□□ 1.92
SMDT1-203ENST00000484235 CNTNAP3BQ96NU0 1288 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 CNTNAP3Q9BZ76 1288 aa27.03■■□□□ 1.92
SMDT1-203ENST00000484235 CPEB1Q9BZB8 566 aaKnown RBP27.03■■□□□ 1.92
SMDT1-203ENST00000484235 TPX2Q9ULW0 747 aaKnown RBP27.03■■□□□ 1.92
SMDT1-203ENST00000484235 ATXN2Q99700 1313 aaKnown RBP27.02■■□□□ 1.92
SMDT1-203ENST00000484235 C10orf142B7Z368 130 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 ARHGAP6O43182 974 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 MFSD11O43934 449 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 PEX11BO96011 259 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 CSNK1DP48730 415 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 CCR5P51681 352 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 GALNT2Q10471 571 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 LBRQ14739 615 aaKnown RBP27.02■■□□□ 1.92
SMDT1-203ENST00000484235 IFI16Q16666 785 aaKnown RBP27.02■■□□□ 1.92
SMDT1-203ENST00000484235 ZNF805Q5CZA5 627 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 SLC23A3Q6PIS1 610 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 GDPD4Q6W3E5 623 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 LRRC8AQ8IWT6 810 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 TSEN2Q8NCE0 465 aaKnown RBP27.02■■□□□ 1.92
SMDT1-203ENST00000484235 NSMCE1Q8WV22 266 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 PSKH2Q96QS6 385 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 CINPQ9BW66 212 aaPredicted RBP27.02■■□□□ 1.92
SMDT1-203ENST00000484235 SEPT3Q9UH03 358 aa27.02■■□□□ 1.92
SMDT1-203ENST00000484235 EIF2B4Q9UI10 523 aaKnown RBP27.02■■□□□ 1.92
SMDT1-203ENST00000484235 GON4LQ3T8J9 2241 aa27.01■■□□□ 1.91
SMDT1-203ENST00000484235 PATE3B3GLJ2 98 aa27.01■■□□□ 1.91
SMDT1-203ENST00000484235 IGHV4-34P06331 123 aa27.01■■□□□ 1.91
SMDT1-203ENST00000484235 ZFXP17010 805 aaPredicted RBP27.01■■□□□ 1.91
SMDT1-203ENST00000484235 CD27P26842 260 aa27.01■■□□□ 1.91
SMDT1-203ENST00000484235 GARSP41250 739 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms