RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CD48P09326 243 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 FECHP22830 423 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 IL4RP24394 825 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 SLC1A1P43005 524 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 IL10RBQ08334 325 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 DPYSL3Q14195 570 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 PUM1Q14671 1186 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMIM4-204ENST00000482728 CYTH1Q15438 398 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 AGBL4Q5VU57 503 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 FBXL19Q6PCT2 694 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 ERN2Q76MJ5 926 aaKnown RBP18.67■□□□□ 0.58
SMIM4-204ENST00000482728 FAM71BQ8TC56 605 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 ARRDC3Q96B67 414 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 OSBPL1AQ9BXW6 950 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 HDAC8Q9BY41 377 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 CAPN10Q9HC96 672 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 TMEM9BQ9NQ34 198 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 KLHL11Q9NVR0 708 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 MFHAS1Q9Y4C4 1052 aa18.67■□□□□ 0.58
SMIM4-204ENST00000482728 NYNRINQ9P2P1 1898 aaKnown RBP18.67■□□□□ 0.58
SMIM4-204ENST00000482728 C4orf47A7E2U8 309 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 ARHGAP33O14559 1287 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 SLC30A4O14863 429 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 SPOPO43791 374 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 IGHV4-34P06331 123 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 TNNT1P13805 278 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 ENGP17813 658 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 ITGB7P26010 798 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 GKP32189 559 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 MAPK8P45983 427 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 ARSEP51690 589 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 AFF3P51826 1226 aaKnown RBP18.66■□□□□ 0.58
SMIM4-204ENST00000482728 LIMK1P53667 647 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 RFTN1Q14699 578 aaPredicted RBP18.66■□□□□ 0.58
SMIM4-204ENST00000482728 TEAD4Q15561 434 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 ANKRD20A8PQ5CZ79 823 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 PRPF39Q86UA1 669 aaKnown RBP18.66■□□□□ 0.58
SMIM4-204ENST00000482728 FAM131CQ96AQ9 280 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 ZNF670Q9BS34 389 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 GTPBP2Q9BX10 602 aaKnown RBP18.66■□□□□ 0.58
SMIM4-204ENST00000482728 PDFQ9HBH1 243 aa18.66■□□□□ 0.58
SMIM4-204ENST00000482728 A0A1W2PPC4 97 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 LRRD1A4D1F6 860 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 PCDH8O95206 1070 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 UGT2B4P06133 528 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 KDELR1P24390 212 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 NEK3P51956 506 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 HADHBP55084 474 aaKnown RBP18.65■□□□□ 0.58
SMIM4-204ENST00000482728 ZNF805Q5CZA5 627 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 PIP5KL1Q5T9C9 394 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 LRRC38Q5VT99 294 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 GDPD4Q6W3E5 623 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 ARHGAP36Q6ZRI8 547 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 TP53INP2Q8IXH6 220 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 RHOT1Q8IXI2 618 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 ATPAF2Q8N5M1 289 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 C1orf216Q8TAB5 229 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 NSMCE1Q8WV22 266 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 ZNF599Q96NL3 588 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 RTKNQ9BST9 563 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 CINPQ9BW66 212 aaPredicted RBP18.65■□□□□ 0.58
SMIM4-204ENST00000482728 MAK16Q9BXY0 300 aaKnown RBP18.65■□□□□ 0.58
SMIM4-204ENST00000482728 PREBQ9HCU5 417 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 FSCN3Q9NQT6 498 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 DLL3Q9NYJ7 618 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 LHX3Q9UBR4 397 aa18.65■□□□□ 0.58
SMIM4-204ENST00000482728 A0A0A6YYK5 440 aaPredicted RBP18.64■□□□□ 0.57
SMIM4-204ENST00000482728 C16orf96A6NNT2 1141 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 RNF103O00237 685 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 COMTP21964 271 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 NUDT1P36639 197 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 CSNK1EP49674 416 aaKnown RBP18.64■□□□□ 0.57
SMIM4-204ENST00000482728 RENBPP51606 427 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 NAP1L1P55209 391 aaKnown RBP18.64■□□□□ 0.57
SMIM4-204ENST00000482728 GRM3Q14832 879 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 UAP1L1Q3KQV9 507 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 NEK5Q6P3R8 708 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 RAD9BQ6WBX8 426 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 ADAT2Q7Z6V5 191 aaKnown RBP18.64■□□□□ 0.57
SMIM4-204ENST00000482728 LRRC49Q8IUZ0 686 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 PCDH19Q8TAB3 1148 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 RAPGEF5Q92565 580 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 EXOC2Q96KP1 924 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 KLHL32Q96NJ5 620 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 CPEB1Q9BZB8 566 aaKnown RBP18.64■□□□□ 0.57
SMIM4-204ENST00000482728 ZDHHC5Q9C0B5 715 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 TM9SF3Q9HD45 589 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 SEPT3Q9UH03 358 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 TFR2Q9UP52 801 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 HYOU1Q9Y4L1 999 aa18.64■□□□□ 0.57
SMIM4-204ENST00000482728 DMXL1Q9Y485 3027 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 NEMP1O14524 444 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 BUB1BO60566 1050 aaPredicted RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 RNGTTO60942 597 aaKnown RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 ADRB3P13945 408 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 MAT2AP31153 395 aaKnown RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 TAS2R38P59533 333 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 RACK1P63244 317 aaKnown RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 LBRQ14739 615 aaKnown RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 SETMARQ53H47 684 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms