RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SAP25Q8TEE9 199 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 CELF6Q96J87 481 aaKnown RBP10.65□□□□□ -0.7
CPSF4-212ENST00000482251 CNDP2Q96KP4 475 aaKnown RBP10.65□□□□□ -0.7
CPSF4-212ENST00000482251 PEBP4Q96S96 227 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 HDAC8Q9BY41 377 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 TTYH3Q9C0H2 523 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 MAGEH1Q9H213 219 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 CBX8Q9HC52 389 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 MYO1AQ9UBC5 1043 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 PCSK1NQ9UHG2 260 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 TPX2Q9ULW0 747 aaKnown RBP10.65□□□□□ -0.7
CPSF4-212ENST00000482251 MYO6Q9UM54 1294 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 AP4E1Q9UPM8 1137 aa10.65□□□□□ -0.7
CPSF4-212ENST00000482251 FREM2Q5SZK8 3169 aa10.65□□□□□ -0.71
CPSF4-212ENST00000482251 COL5A1P20908 1838 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 A0A1W2PQC6 194 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 RASA4BC9J798 803 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 DDX3XO00571 662 aaKnown RBP eCLIP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 NEMP1O14524 444 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 ENC1O14682 589 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 RASA4O43374 803 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 KDELR3O43731 214 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 DFNA5O60443 496 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 HNRNPA2B1P22626 353 aaKnown RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 GEMIN4P57678 1058 aaKnown RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 RHOAP61586 193 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 SLC20A2Q08357 652 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 CCDC15Q0P6D6 951 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 FGL2Q14314 439 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 TMEM259Q4ZIN3 620 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 TDRD12Q587J7 1177 aaKnown RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 ZNF542PQ5EBM4 170 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 GCNT7Q6ZNI0 430 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 SLC22A18ASQ8N1D0 253 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 KDF1Q8NAX2 398 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 KLHDC7BQ96G42 594 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 GDAP1L1Q96MZ0 367 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 KLHL32Q96NJ5 620 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 SNRNP25Q9BV90 132 aaKnown RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 DHX35Q9H5Z1 703 aaKnown RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 CATSPERBQ9H7T0 1116 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 PARVAQ9NVD7 372 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 CNOT8Q9UFF9 292 aaKnown RBP10.64□□□□□ -0.71
CPSF4-212ENST00000482251 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 PLXNB3Q9ULL4 1909 aa10.64□□□□□ -0.71
CPSF4-212ENST00000482251 TMEM8BA6NDV4 472 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 C16orf96A6NNT2 1141 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 EEF2KO00418 725 aaKnown RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 RAD51BO15315 384 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 YKT6O15498 198 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 INSIG1O15503 277 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 FFAR2O15552 330 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 SPINT1O43278 529 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 MAGEC1O60732 1142 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 PIGNO95427 931 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 LDOC1O95751 146 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 IGSF6O95976 241 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 PAK4O96013 591 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 GSRP00390 522 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 FTLP02792 175 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 NUDT1P36639 197 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 SNRPD1P62314 119 aaKnown RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 FANCCQ00597 558 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 KLHL40Q2TBA0 621 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 ZNF805Q5CZA5 627 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 PPP6R3Q5H9R7 873 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 PLEKHA7Q6IQ23 1121 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 IQCHQ86VS3 1027 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 OXR1Q8N573 874 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 ARFGAP1Q8N6T3 406 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 MDM1Q8TC05 714 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 VOPP1Q96AW1 172 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 ISG20Q96AZ6 181 aaKnown RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 KCTD15Q96SI1 283 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-212ENST00000482251 NCAPGQ9BPX3 1015 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 UCKL1Q9NWZ5 548 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 AIPL1Q9NZN9 384 aa10.63□□□□□ -0.71
CPSF4-212ENST00000482251 TRPM6Q9BX84 2022 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 POM121BA6NF01 834 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 ZSCAN5CA6NGD5 496 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 IGLON5A6NGN9 336 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 SRRM3A6NNA2 597 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 A6NNZ2 444 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 J3KR12 359 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 FGF10O15520 208 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 PRPSAP2O60256 369 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 RFPL3O75679 317 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 DKK1O94907 266 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 TCF4P15884 667 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 ITIH2P19823 946 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 MIPP30301 263 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 PRKCIP41743 596 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 ACADVLP49748 655 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 AIF1P55008 147 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 RPS21P63220 83 aaKnown RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 TPM4P67936 248 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 OVGP1Q12889 678 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 SERINC3Q13530 473 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 NR1I3Q14994 352 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 SMTNL2Q2TAL5 461 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms