RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 EEA1Q15075 1411 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 FMN1Q68DA7 1419 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 SETD5Q9C0A6 1442 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 CCDC195A0A1B0GUA6 201 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 GXYLT2A0PJZ3 443 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 A1L4Q6 167 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RGSL1A5PLK6 1076 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 ZNF503-AS2A6NEH8 195 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 A8MZ25 164 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 NKX2-8O15522 239 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PAPSS1O43252 624 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 TSPAN9O75954 239 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 DDAH2O95865 285 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 IFNB1P01574 187 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 KRT10P13645 584 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 FERP16591 822 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 CDKN1AP38936 164 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 IL15P40933 162 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 CXCR3P49682 368 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 POLE2P56282 527 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RPL7AP62424 266 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 MRPS35P82673 323 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 E2F1Q01094 437 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 NHLH2Q02577 135 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 GRAPQ13588 217 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RCN2Q14257 317 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PUM1Q14671 1186 aaKnown RBP eCLIP2.78□□□□□ -1.96
XRN1-210ENST00000472697 SSPNQ14714 243 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PDCD4Q53EL6 469 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 PARP10Q53GL7 1025 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 CNSTQ6PJW8 725 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 DPP8Q6V1X1 898 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 MEX3BQ6ZN04 569 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 QSOX2Q6ZRP7 698 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 Q6ZUG5 572 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 C1orf186Q6ZWK4 172 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 HAPLN4Q86UW8 402 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 KRT73Q86Y46 540 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 BRSK2Q8IWQ3 736 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 TP53INP2Q8IXH6 220 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RPAP2Q8IXW5 612 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 SCAIQ8N9R8 606 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 ZNF540Q8NDQ6 660 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 FLAD1Q8NFF5 587 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 OSCP1Q8WVF1 389 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 NXNL1Q96CM4 212 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 HIC2Q96JB3 615 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PPP1R10Q96QC0 940 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 FIZ1Q96SL8 496 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PAAF1Q9BRP4 392 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 KATNB1Q9BVA0 655 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 TPSD1Q9BZJ3 242 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 SLC6A15Q9H2J7 730 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 ZNF768Q9H5H4 540 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 TTC12Q9H892 705 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.78□□□□□ -1.96
XRN1-210ENST00000472697 RRP7BPQ9NSQ0 103 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RASAL2Q9UJF2 1139 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RNF150Q9ULK6 438 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 R3HDM2Q9Y2K5 976 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 VWA7Q9Y334 891 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 ADGRB2O60241 1585 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 DCCP43146 1447 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 CDC42BPAQ5VT25 1732 aa2.78□□□□□ -1.97
XRN1-210ENST00000472697 KAT6AQ92794 2004 aa2.78□□□□□ -1.97
XRN1-210ENST00000472697 IGSF1Q8N6C5 1336 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 LOC102723996A0A087X1L8 192 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ZSCAN5CA6NGD5 496 aaPredicted RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 EFCAB8A8MWE9 144 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 K7EPI3 171 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 SEPT4O43236 478 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 SYNCRIPO60506 623 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 TLR2O60603 784 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PTMAP06454 111 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 SCG2P13521 617 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 P4HA1P13674 534 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 BSGP35613 385 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 TMPRSS3P57727 454 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PSG6Q00889 435 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 FZD5Q13467 585 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 GXYLT1Q4G148 440 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 STRIP1Q5VSL9 837 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CFAP77Q6ZQR2 320 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 CXXC5Q7LFL8 322 aaKnown RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 NUDT13Q86X67 352 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 SYNE4Q8N205 404 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PI4KAP1Q8N8J0 262 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 EXD3Q8N9H8 876 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 NLGN4YQ8NFZ3 816 aaPredicted RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 FAM110DQ8TAY7 271 aaPredicted RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 ATP2A3Q93084 1043 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 WBP2Q969T9 261 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 ST6GALNAC6Q969X2 333 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 SLC7A6OSQ96CW6 309 aaPredicted RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 TCEANC2Q96MN5 208 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 OLFM1Q99784 485 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 PI4K2AQ9BTU6 479 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 DPCDQ9BVM2 203 aaPredicted RBP2.77□□□□□ -1.97
XRN1-210ENST00000472697 SH2D4AQ9H788 454 aa2.77□□□□□ -1.97
XRN1-210ENST00000472697 COPS7BQ9H9Q2 264 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms