RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 M0QZQ0 153 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 ATXN7O15265 892 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 ENTPD5O75356 428 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 CABYRO75952 493 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 TM7SF2O76062 418 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 JCHAINP01591 159 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 BMP4P12644 408 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 ALOX15P16050 662 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 GNAZP19086 355 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 NCF2P19878 526 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 ATP6V1C1P21283 382 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 FGFR3P22607 806 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 BDNFP23560 247 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 CRABP2P29373 138 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 GCKP35557 465 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 GRIK1P39086 918 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 MAGEA12P43365 314 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 PTDSS1P48651 473 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 HARS2P49590 506 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 SESN3P58005 492 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 PSMA6P60900 246 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 MRPS35P82673 323 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 YWHAHQ04917 246 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 PRKAA1Q13131 559 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 ITGA9Q13797 1035 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 UBAP2LQ14157 1087 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 USP10Q14694 798 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 PPP2R5DQ14738 602 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 KPNB1Q14974 876 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 NFE2Q16621 373 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 TIGD5Q53EQ6 642 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 HSP90AA5PQ58FG0 334 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 C1orf146Q5VVC0 180 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 KCTD11Q693B1 232 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 FSTL4Q6MZW2 842 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 C16orf46Q6P387 395 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 FAM171BQ6P995 826 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 GLB1LQ6UWU2 654 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 C17orf99Q6UX52 265 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 RINLQ6ZS11 566 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 ZCCHC23Q6ZST2 131 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 C10orf107Q8IVU9 208 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 NPWQ8N729 165 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 PCSK9Q8NBP7 692 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 ZMIZ2Q8NF64 920 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 DQX1Q8TE96 717 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 ZDHHC1Q8WTX9 485 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 SCG3Q8WXD2 468 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 STON2Q8WXE9 905 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 LPPQ93052 612 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 TSPAN17Q96FV3 270 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 VPS39Q96JC1 886 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 FAM193BQ96PV7 902 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 FCRL5Q96RD9 977 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 KCNK16Q96T55 309 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 SERPINI1Q99574 410 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 TRIM56Q9BRZ2 755 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 MLPHQ9BV36 600 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 KIFC1Q9BW19 673 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 CCDC106Q9BWC9 280 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 MAGEB5Q9BZ81 275 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 ILKAPQ9H0C8 392 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 CDH19Q9H159 772 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 UPF3AQ9H1J1 476 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 SMOC2Q9H3U7 446 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 FBXO44Q9H4M3 255 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 TASP1Q9H6P5 420 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 PIH1D1Q9NWS0 290 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 ARHGEF38Q9NXL2 777 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 TAS2R1Q9NYW7 299 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 STX18Q9P2W9 335 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 VTI1BQ9UEU0 232 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 SLC39A10Q9ULF5 831 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 ARHGAP26Q9UNA1 814 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 TRPM7Q96QT4 1865 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 PATJQ8NI35 1801 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SHROOM3Q8TF72 1996 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 A0A0U1RQF3 1178 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ZCWPW2A0A1B0GU75 182 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 HEATR9A2RTY3 570 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 DCDC2BA2VCK2 349 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 C2orf71A6NGG8 1288 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 PRR5-ARHGAP8B1AHC4 643 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 FAM72CH0Y354 149 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 MATN3O15232 486 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SLC22A2O15244 555 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 KIF1CO43896 1103 aaKnown RBP8.1□□□□□ -1.11
SMC4-212ENST00000470240 BNIP3LO60238 219 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 USP12O75317 370 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 DDHD2O94830 711 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 FYNP06241 537 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 CYBAP13498 195 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 STMN1P16949 149 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 SERPINB5P36952 375 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 CPA2P48052 419 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 RENBPP51606 427 aa8.1□□□□□ -1.11
SMC4-212ENST00000470240 ARHGAP8P85298 464 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms