RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 E2F5Q15329 346 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 ANO7Q6IWH7 933 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 TTC27Q6P3X3 843 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 MAMSTRQ6ZN01 415 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 RYBPQ8N488 228 aaPredicted RBP15□□□□□ -0.01
COL9A3-209ENST00000469852 MDGA1Q8NFP4 955 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 TSTD1Q8NFU3 115 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 OR2T3Q8NH03 318 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 NSMCE1Q8WV22 266 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 HMGB4Q8WW32 186 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 NKD2Q969F2 451 aaPredicted RBP15□□□□□ -0.01
COL9A3-209ENST00000469852 MRGPRX1Q96LB2 322 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 PRRX2Q99811 253 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 MGME1Q9BQP7 344 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 TMEM121Q9BTD3 319 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 RSPH9Q9H1X1 276 aaPredicted RBP15□□□□□ -0.01
COL9A3-209ENST00000469852 ZDHHC6Q9H6R6 413 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 HECAQ9UBI9 543 aaPredicted RBP15□□□□□ -0.01
COL9A3-209ENST00000469852 SLC8A2Q9UPR5 921 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 ATP8A1Q9Y2Q0 1164 aa15□□□□□ -0.01
COL9A3-209ENST00000469852 F5H423 210 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 KCNN4O15554 427 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 PAPSS2O95340 614 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 PIGNO95427 931 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 IGSF6O95976 241 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 CHRNA3P32297 505 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 KCNJ1P48048 391 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 RENBPP51606 427 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 CCR3P51677 355 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 RPS14P62263 151 aaKnown RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 SNRPD1P62314 119 aaKnown RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 DSC2Q02487 901 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 NIPAL4Q0D2K0 466 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 BYSLQ13895 437 aaKnown RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 ELAVL3Q14576 367 aaKnown RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 CCNG2Q16589 344 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 MYLK3Q32MK0 819 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 POM121L1PQ3SYA9 428 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 TEX44Q53QW1 395 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 HEATR6Q6AI08 1181 aaKnown RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 SRLQ86TD4 932 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 PRUNE1Q86TP1 453 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 METTL3Q86U44 580 aaKnown RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 MMAAQ8IVH4 418 aaKnown RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 C1orf210Q8IVY1 113 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 PLPP6Q8IY26 295 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 ZNF567Q8N184 647 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 FAM71DQ8N9W8 422 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 GLIS1Q8NBF1 620 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 ARRDC2Q8TBH0 407 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 GRIN3AQ8TCU5 1115 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 OR8D1Q8WZ84 308 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 GDAP1L1Q96MZ0 367 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 AGAP3Q96P47 875 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 TPSD1Q9BZJ3 242 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 POLMQ9NP87 494 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-209ENST00000469852 TTLL3Q9Y4R7 772 aa14.99□□□□□ -0.01
COL9A3-209ENST00000469852 PLK4O00444 970 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 KRIT1O00522 736 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 ZBTB24O43167 697 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-209ENST00000469852 LAMTOR5O43504 91 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 LEFTY1O75610 366 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 MMP2P08253 660 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 PSMD8P48556 350 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 SCNN1BP51168 640 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 NSUN2Q08J23 767 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL9A3-209ENST00000469852 ARSIQ5FYB1 569 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 ALG1LQ6GMV1 187 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 RASSF3Q86WH2 238 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 TMPRSS6Q8IU80 811 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 PIP4K2CQ8TBX8 421 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 TEKT5Q96M29 485 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 NUDCD1Q96RS6 583 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 SEMA3CQ99985 751 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 GORASP1Q9BQQ3 440 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 HEPHQ9BQS7 1158 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 FRMD8P1Q9BZ68 369 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-209ENST00000469852 NOD2Q9HC29 1040 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 SERGEFQ9UGK8 458 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 EBF1Q9UH73 591 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 IL36AQ9UHA7 158 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 PPM1HQ9ULR3 514 aa14.98□□□□□ -0.01
COL9A3-209ENST00000469852 ESPNB1AK53 854 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 ALOX15BO15296 676 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 MID1O15344 667 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 APBB3O95704 486 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 IL1BP01584 269 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 C7P10643 843 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 ETS1P14921 441 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 NFKB1P19838 968 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 HSPA9P38646 679 aaKnown RBP14.97□□□□□ -0.01
COL9A3-209ENST00000469852 RECQLP46063 649 aaPredicted RBP14.97□□□□□ -0.01
COL9A3-209ENST00000469852 CSNK1DP48730 415 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 CSTF1Q05048 431 aaKnown RBP14.97□□□□□ -0.01
COL9A3-209ENST00000469852 ITKQ08881 620 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 CST6Q15828 149 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 CYP1B1Q16678 543 aa14.97□□□□□ -0.01
COL9A3-209ENST00000469852 ZNF776Q68DI1 518 aaPredicted RBP14.97□□□□□ -0.01
COL9A3-209ENST00000469852 DRICH1Q6PGQ1 229 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms